MirGeneDB 3.0

MirGeneDB ID

Cfa-Mir-574

Family name MIR-574 (all species)
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-574
Paralogues
Orthologues Bta-Mir-574  Cja-Mir-574  Cpo-Mir-574  Dno-Mir-574  Eca-Mir-574  Ete-Mir-574  Hsa-Mir-574  Laf-Mir-574  Mml-Mir-574  Mmr-Mir-574  Mmu-Mir-574  Ocu-Mir-574  Pab-Mir-574 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)
chr3: 73494062-73494119 [-] UCSC Ensembl
Seed ACGCUCA
Precursor
(pre-Mir +30nt flank)
GGCCCAGGGCCCUGCGUGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCCGGGUCCACGCUCAUGCACACACCCACACGCCCGCGCUCGGGGUCUGCGCCCUCGGCC
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Structure
        10          20        30        40        50         
GGCCCAGGGCCCUGCGU--|              AGU                 UGUCGC 
                   GGGUGCGGGCGUGUG   GUGUGUGUGUGAGUGUG      U
                   CUCGCGCCCGCACAC   CACACACGUACUCGCAC      C
CCGGCUCCCGCGUCUGGGG^              C--                 CUGGGC 
      110       100        90          80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-574_5p*

mirBase accessionNone
Sequence
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
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Mature sequence

Cfa-Mir-574_3p

mirBase accessionMIMAT0006673
Sequence
36- CACGCUCAUGCACACACCCACA -58
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Proposed targets TargetScanVert: cfa-miR-574
miRDB: MIMAT0006673