| MirGeneDB ID | Ocu-Mir-672 |
|---|
| Family name |
MIR-672 (all species) |
|---|
| Seed |
GAGGUUG |
|---|
| Species |
Rabbit (Oryctolagus cuniculus) |
|---|
| MiRBase ID |
ocu-mir-672
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cpo-Mir-672
Dno-Mir-672
Ete-Mir-672
Mmu-Mir-672
Rno-Mir-672
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(oryCun2_add) |
chrUn0059: 1030796-1030855 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUACAAGAUGGUGAUCUAGCCCUUUAGUUUUGAGGUUGGUGUACUGUGUGUGAGUAUACAUAUUUAUCACACACAGUCACUAUCUUCGAAAGUGAGGGUGCACAUCUUUCUCAGCCAUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUACAAGAUGGUGAUCUA- -| G U U GUAUAC
GC CCUUUA UUUUGAGG UGGUG ACUGUGUGUGA \
CG GGGAGU AAAGCUUC AUCAC UGACACACACU A
UCUACCGACUCUUUCUACA U^ G U - AUUUAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Ocu-Mir-672_5p |
| mirBase accession | MIMAT0048557 |
|---|
| Sequence |
0- UGAGGUUGGUGUACUGUGUGUGA -23
Get sequence
|
|---|
| Star sequence |
Ocu-Mir-672_3p* |
| mirBase accession | MIMAT0048558 |
|---|
| Sequence |
38- ACACACAGUCACUAUCUUCGAA -60
Get sequence
|
|---|
