| MirGeneDB ID | Ete-Mir-672 |
|---|
| Family name |
MIR-672 (all species) |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Cja-Mir-672
Cpo-Mir-672
Dno-Mir-672
Laf-Mir-672
Mmr-Mir-672
Mmu-Mir-672
Ocu-Mir-672
Rno-Mir-672
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(echTel2) |
JH980401: 2575282-2575341 [-]
UCSC
|
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| Seed |
GAGGUUG |
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Precursor
(pre-Mir +30nt flank) |
UUACAAGAUGGUGAUUUAGCCCUUUAGUUUUGAGGUUGGUGUACUGUGUGUGAGUACAUAUAUUUAUCACACACAGUCACUAUCUUCGAAAGUGAGGGUGCACAUCUUUCUGAGCCAUCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUACAAGAUGGUGAUUUA- -| G U U GUACAU
GC CCUUUA UUUUGAGG UGGUG ACUGUGUGUGA \
CG GGGAGU AAAGCUUC AUCAC UGACACACACU A
UCUACCGAGUCUUUCUACA U^ G U - AUUUAU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
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|
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| Mature sequence |
Ete-Mir-672_5p |
| mirBase accession | None |
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| Sequence |
0- UGAGGUUGGUGUACUGUGUGUGA -23
Get sequence
|
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| Star sequence |
Ete-Mir-672_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
38- ACACACAGUCACUAUCUUCGAA -60
Get sequence
|
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