MirGeneDB ID | Dno-Mir-672 |
Family name |
MIR-672 (all species) |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-672
|
Paralogues |
|
Orthologues |
Cja-Mir-672
Cpo-Mir-672
Ete-Mir-672
Laf-Mir-672
Mmr-Mir-672
Mmu-Mir-672
Ocu-Mir-672
Rno-Mir-672
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
JH581116: 278677-278738 [-]
UCSC
Ensembl
|
Seed |
GAGGUUG |
Precursor (pre-Mir +30nt flank) |
UUGCAAGAUGGCAAUCUAGCCCUUUAGUUUUGAGGUUGGUGUACUGUGUGUGAGUAUAUAUAUACUUAUCACACACAGUAGCUAUCUUCAAAAGUGAGGGUGCACAUCUUUCUGAGCCAUCU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUGCAAGAUGGCAAUCUA- -| G U G GUAUAUA
GC CCUUUA UUUUGAGG UGGU UACUGUGUGUGA \
CG GGGAGU AAAACUUC AUCG AUGACACACACU U
UCUACCGAGUCUUUCUACA U^ G U - AUUCAUA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Dno-Mir-672_5p |
mirBase accession | MIMAT0048000 |
Sequence |
0- UGAGGUUGGUGUACUGUGUGUGA -23
Get sequence
|
Star sequence |
Dno-Mir-672_3p* |
mirBase accession | MIMAT0048001 |
Sequence |
40- ACACACAGUAGCUAUCUUCAAA -62
Get sequence
|