MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-1912

Family name MIR-1912 (all species)
Seed ACCCAGA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1912  Cfa-Mir-1912  Cpo-Mir-1912  Ete-Mir-1912  Hsa-Mir-1912  Mml-Mir-1912  Mmu-Mir-1912  Rno-Mir-1912 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chrX: 63087552-63087607 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCACAGCUGGACUUGGCUCUAGGAUGUGCUCAUUGCAUGGGCUGUGUAUAUUUUUUAUUCAAUACCCAGAGCAUGCAGUGUGAACAUAAUAGAGAUUAAAAGGCAGUCAGAAGA
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Structure
        10          20        30        40        50       
UAUCACAGCUGGACUUGG--|    GG    GCU         GG   U    AUUUU 
                    CUCUA  AUGU   CAUUGCAUG  CUG GUAU     U
                    GAGAU  UACA   GUGACGUAC  GAC CAUA     U
AGAAGACUGACGGAAAAUUA^    AA    AGU         GA   C    ACUUA 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
He Ki Te To Wh
Star sequence

Ocu-Mir-1912_5p* (predicted)

mirBase accessionNone
Sequence
0- CUCAUUGCAUGGGCUGUGUAUA -22
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Mature sequence

Ocu-Mir-1912_3p (predicted)

mirBase accessionNone
Sequence
34- UACCCAGAGCAUGCAGUGUGAA -56
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