MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-1912

Family name MIR-1912 (all species)
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1912  Cfa-Mir-1912  Cja-Mir-1912  Cpo-Mir-1912  Eca-Mir-1912  Ete-Mir-1912  Hsa-Mir-1912  Laf-Mir-1912  Mml-Mir-1912  Mmu-Mir-1912  Ocu-Mir-1912  Pab-Mir-1912  Rno-Mir-1912 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007693.1: 42597656-42597710 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1912)
Mir-1912 CM007693.1: 42597656-42597710 [+] UCSC Ensembl
Mir-1264 CM007693.1: 42598756-42598818 [+] UCSC Ensembl
Mir-1298 CM007693.1: 42645967-42646040 [+] UCSC Ensembl
Seed ACCCAGA
Precursor
(pre-Mir +30nt flank)
UAUCACAACUGGACUUGGCUCUAGGAUGUGCUCAUUGCAUGGGCUGUGUAUAUUAUUAUUUAAUACCCAGAACGUGCAGUGUGAACAUAAUAGAGAUUGAAAGACAGCCAGAAGG
Get precursor sequence
Structure
        10          20        30        40        50       
UAUCACAACUGGACUUGG--|    GG    GCU         GG   U    AUUAU 
                    CUCUA  AUGU   CAUUGCAUG  CUG GUAU     \
                    GAGAU  UACA   GUGACGUGC  GAC CAUA     U
GGAAGACCGACAGAAAGUUA^    AA    AGU         AA   C    AUUUA 
   110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-1912_5p* (predicted)

mirBase accessionNone
Sequence
0- CUCAUUGCAUGGGCUGUGUAUA -22
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Mature sequence

Mmr-Mir-1912_3p (predicted)

mirBase accessionNone
Sequence
33- UACCCAGAACGUGCAGUGUGAA -55
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