| MirGeneDB ID | Lch-Mir-126-P2 |
|---|---|
| Family name | MIR-126 (all species) |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-126-P2-v1 Ami-Mir-126-P2-v1 Bta-Mir-126-P2-v1 Cfa-Mir-126-P2-v1 Cja-Mir-126-P2-v1 Cli-Mir-126-P2-v1 Cmi-Mir-126-P2-v1 Cpi-Mir-126-P2-v1 Cpo-Mir-126-P2-v1 Dno-Mir-126-P2-v1 Dre-Mir-126-P2a-v1 Dre-Mir-126-P2b-v1 Eca-Mir-126-P2-v1 Ete-Mir-126-P2-v1 Gga-Mir-126-P2-v1 Gja-Mir-126-P2-v1 Gmo-Mir-126-P2b-v1 Hsa-Mir-126-P2-v1 Laf-Mir-126-P2-v1 Loc-Mir-126-P2-v1 Mal-Mir-126-P2b-v1 Mdo-Mir-126-P2-v1 Mml-Mir-126-P2-v1 Mmr-Mir-126-P2-v1 Mmu-Mir-126-P2-v1 Mun-Mir-126-P2-v1 Neu-Mir-126-P2-v1 Oan-Mir-126-P2-v1 Ocu-Mir-126-P2-v1 Pab-Mir-126-P2-v1 Pbv-Mir-126-P2-v1 Rno-Mir-126-P2-v1 Sha-Mir-126-P2-v1 Spt-Mir-126-P2 Sto-Mir-126-P2-v1 Tgu-Mir-126-P2-v1 Tni-Mir-126-P2b-v1 Xla-Mir-126-P2c Xla-Mir-126-P2d Xtr-Mir-126-P2-v1 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Olfactores |
| Genome context (LatCha1_add) |
JH126573.1: 3011673-3011731 [-] Ensembl |
| Seed | CGUACCG |
| Precursor (pre-Mir +30nt flank) |
AGAGACAACCAAGAGAUGUUGGUGACGGUCCAUUAUUACUUUUGGUACGCGCUGUGACACUUCAAACUCGUACCGUGAGUAAUAAUGCGCAGUGGCCAGCACUUGCAACGGAGAGAAGAGet precursor sequence |
| Structure | 10 20 30 40 50 AGAGACAACCAAGAGAU--| G G C U CGCUGUGAC GUUGGU AC GU CAUUAUUACUU UGGUACG \ CGACCG UG CG GUAAUAAUGAG GCCAUGC A AGAAGAGAGGCAACGUUCA^ G A C U UCAAACUUC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
| Star sequence | Lch-Mir-126-P2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CAUUAUUACUUUUGGUACGCGC -22
Get sequence
|
| Mature sequence | Lch-Mir-126-P2_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- UCGUACCGUGAGUAAUAAUGCG -59
Get sequence
|
