| MirGeneDB ID | Laf-Mir-598 |
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| Family name |
MIR-598 (all species) |
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| Species |
African bush elephant (Loxodonta africana) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cja-Mir-598
Cpo-Mir-598
Ete-Mir-598
Hsa-Mir-598
Mml-Mir-598
Mmr-Mir-598
Mmu-Mir-598
Pab-Mir-598
Rno-Mir-598-P1
Rno-Mir-598-P2
|
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_000001905.1_Loxafr3.0) |
GL010049.1: 2491075-2491132 [+]
UCSC
Ensembl
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| Seed |
ACGUCAU |
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Precursor
(pre-Mir +30nt flank) |
GAAGAUGGUUUGAUGAUACUGCUGAUGCUGGCGGUGAUGCCGAUGGUGGGAGCUGGAAAUAGGUGCUACGUCAUCGUUGUCAUCGUCAUCAUCAUCAUCUGAGCAACCACCCUGUAGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GAAGAUGGUUUGAUGAUAC--| C C GC GU GG UGGAA
UG UGAUG UGGCGGUGAU CGAUG G AGC \
AC ACUAC ACUGCUACUG GCUAC C UCG A
CGAUGUCCCACCAACGAGUCU^ U U UU UG A- UGGAU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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|
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| Star sequence |
Laf-Mir-598_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- GCGGUGAUGCCGAUGGUGGGAGC -23
Get sequence
|
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| Mature sequence |
Laf-Mir-598_3p |
| mirBase accession | None |
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| Sequence |
36- UACGUCAUCGUUGUCAUCGUCA -58
Get sequence
|
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