MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P8

Family name MIR-154 (all species)
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P8a  Bta-Mir-154-P8b  Cfa-Mir-154-P8a  Cfa-Mir-154-P8b  Cja-Mir-154-P8a  Cpo-Mir-154-P8-o1  Dno-Mir-154-P8a  Dno-Mir-154-P8b  Eca-Mir-154-P8a  Eca-Mir-154-P8b  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Hsa-Mir-154-P8a  Hsa-Mir-154-P8b  Mml-Mir-154-P8a  Mml-Mir-154-P8b  Mmr-Mir-154-P8a  Mmr-Mir-154-P8b  Mmu-Mir-154-P8-o1  Ocu-Mir-154-P8-o1  Pab-Mir-154-P8a  Pab-Mir-154-P8b  Rno-Mir-154-P8-o1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75557501-75557560 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-154-P8)		 Mir-154-P34 GL010036.1: 75515670-75515725 [-] UCSC Ensembl
Mir-154-P6c GL010036.1: 75515924-75515978 [-] UCSC Ensembl
Mir-154-P33 GL010036.1: 75516442-75516497 [-] UCSC Ensembl
Mir-154-P32 GL010036.1: 75516745-75516800 [-] UCSC Ensembl
Mir-154-P31 GL010036.1: 75516896-75516950 [-] UCSC Ensembl
Mir-154-P30 GL010036.1: 75517046-75517099 [-] UCSC Ensembl
Mir-541 GL010036.1: 75517877-75517942 [-] UCSC Ensembl
Mir-154-P29 GL010036.1: 75519883-75519942 [-] UCSC Ensembl
Mir-154-P28 GL010036.1: 75521503-75521556 [-] UCSC Ensembl
Mir-154-P27 GL010036.1: 75522076-75522136 [-] UCSC Ensembl
Mir-154-P26 GL010036.1: 75522398-75522455 [-] UCSC Ensembl
Mir-154-P6b GL010036.1: 75526418-75526474 [-] UCSC Ensembl
Mir-154-P25 GL010036.1: 75527246-75527302 [-] UCSC Ensembl
Mir-154-P24 GL010036.1: 75528356-75528413 [-] UCSC Ensembl
Mir-154-P23 GL010036.1: 75531976-75532033 [-] UCSC Ensembl
Mir-154-P22 GL010036.1: 75532426-75532479 [-] UCSC Ensembl
Mir-154-P21 GL010036.1: 75534811-75534870 [-] UCSC Ensembl
Mir-544 GL010036.1: 75535725-75535783 [-] UCSC Ensembl
Mir-154-P20 GL010036.1: 75536489-75536547 [-] UCSC Ensembl
Mir-154-P19 GL010036.1: 75537069-75537132 [-] UCSC Ensembl
Mir-154-P18 GL010036.1: 75537837-75537894 [-] UCSC Ensembl
Mir-154-P17 GL010036.1: 75538378-75538440 [-] UCSC Ensembl
Mir-154-P16 GL010036.1: 75541362-75541421 [-] UCSC Ensembl
Mir-154-P15 GL010036.1: 75542647-75542709 [-] UCSC Ensembl
Mir-376-P5 GL010036.1: 75543242-75543299 [-] UCSC Ensembl
Mir-376-P4 GL010036.1: 75543582-75543639 [-] UCSC Ensembl
Mir-376-P3 GL010036.1: 75543962-75544019 [-] UCSC Ensembl
Mir-376-P2 GL010036.1: 75544329-75544386 [-] UCSC Ensembl
Mir-376-P1 GL010036.1: 75544697-75544754 [-] UCSC Ensembl
Mir-154-P12 GL010036.1: 75550220-75550277 [-] UCSC Ensembl
Mir-154-P11 GL010036.1: 75552026-75552083 [-] UCSC Ensembl
Mir-154-P10 GL010036.1: 75553932-75553988 [-] UCSC Ensembl
Mir-154-P9 GL010036.1: 75554345-75554400 [-] UCSC Ensembl
Mir-154-P8 GL010036.1: 75557501-75557560 [-] UCSC Ensembl
Mir-154-P7 GL010036.1: 75558250-75558307 [-] UCSC Ensembl
Mir-154-P6a GL010036.1: 75558547-75558602 [-] UCSC Ensembl
Mir-154-P5 GL010036.1: 75558709-75558763 [-] UCSC Ensembl
Mir-154-P4 GL010036.1: 75559248-75559304 [-] UCSC Ensembl
Mir-154-P3 GL010036.1: 75560482-75560536 [-] UCSC Ensembl
Mir-154-P2 GL010036.1: 75560939-75560994 [-] UCSC Ensembl
Mir-154-P1 GL010036.1: 75562213-75562271 [-] UCSC Ensembl
Seed ACACACC
Precursor
(pre-Mir +30nt flank)		 
CUUGUCAGUGUUAAUCUGUAGUACCCGAAGAGAGGUUUCCUGGGUUUCGGUUUCUUUUUUGAUGAUGAAACACACCUGGUUAACCUCUUUUCCAGUAUCAGAUCCCACCUUGGGAGGCCU
Get precursor sequence
Structure
        10        20          30        40        50        60
CUUGUCAGUGUUAAUCUGUA--|   CC           UC UG   UUCG     UUUUU 
                      GUAC  GAAGAGAGGUU  C  GGU    GUUUC     U
                      UAUG  CUUUUCUCCAA  G  CCA    CAAAG     G
UCCGGAGGGUUCCACCCUAGAC^   AC           UU GU   CA--     UAGUA 
.       110       100        90        80          70
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Wh
Star sequence

Laf-Mir-154-P8_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGAGGUUUCCUGGGUUUCGGUUUC -24
Get sequence
Mature sequence

Laf-Mir-154-P8_3p (predicted)
mirBase accessionNone
Sequence 
38- AACACACCUGGUUAACCUCUUU -60
Get sequence