Mir-376-P4

MirGeneDB ID

Hsa-Mir-376-P4

Family name

MIR-376 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-376b

Paralogues

Hsa-Mir-376-P1 Hsa-Mir-376-P2 Hsa-Mir-376-P3 Hsa-Mir-376-P5

Orthologues

Bta-Mir-376-P4 Cfa-Mir-376-P4 Cja-Mir-376-P4 Cpo-Mir-376-P4 Dno-Mir-376-P4 Eca-Mir-376-P4 Laf-Mir-376-P4 Mml-Mir-376-P4 Mmr-Mir-376-P4 Mmu-Mir-376-P4 Ocu-Mir-376-P4 Pab-Mir-376-P4 Rno-Mir-376-P4

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(hg38)

chr14: 101040460-101040517 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-376-P4)

Mir-154-P1 chr14: 101022071-101022129 [+] UCSC Ensembl
Mir-154-P2-v2 chr14: 101023339-101023396 [+] UCSC Ensembl
Mir-154-P2-v1 chr14: 101023340-101023395 [+] UCSC Ensembl
Mir-154-P3-v1 chr14: 101023799-101023853 [+] UCSC Ensembl
Mir-154-P3-v2 chr14: 101023800-101023852 [+] UCSC Ensembl
Mir-154-P4 chr14: 101025020-101025076 [+] UCSC Ensembl
Mir-154-P5 chr14: 101025585-101025640 [+] UCSC Ensembl
Mir-154-P6a-v1 chr14: 101025747-101025802 [+] UCSC Ensembl
Mir-154-P6a-v2 chr14: 101025747-101025802 [+] UCSC Ensembl
Mir-154-P7 chr14: 101026035-101026092 [+] UCSC Ensembl
Mir-154-P8a chr14: 101026796-101026855 [+] UCSC Ensembl
Mir-154-P8b chr14: 101027113-101027172 [+] UCSC Ensembl
Mir-154-P9 chr14: 101029648-101029703 [+] UCSC Ensembl
Mir-154-P10 chr14: 101030064-101030120 [+] UCSC Ensembl
Mir-154-P11 chr14: 101031997-101032054 [+] UCSC Ensembl
Mir-154-P12 chr14: 101033768-101033825 [+] UCSC Ensembl
Mir-376-P1 chr14: 101039358-101039415 [+] UCSC Ensembl
Mir-376-P2 chr14: 101039695-101039752 [+] UCSC Ensembl
Mir-376-P3 chr14: 101040081-101040138 [+] UCSC Ensembl
Mir-154-P14 chr14: 101040234-101040289 [+] UCSC Ensembl
Mir-376-P4 chr14: 101040460-101040517 [+] UCSC Ensembl
Mir-376-P5 chr14: 101040788-101040845 [+] UCSC Ensembl
Mir-154-P16a chr14: 101042991-101043050 [+] UCSC Ensembl
Mir-154-P16b chr14: 101044212-101044271 [+] UCSC Ensembl
Mir-154-P17 chr14: 101045927-101045989 [+] UCSC Ensembl
Mir-154-P18 chr14: 101046469-101046526 [+] UCSC Ensembl
Mir-154-P19 chr14: 101047329-101047392 [+] UCSC Ensembl
Mir-154-P20 chr14: 101047911-101047969 [+] UCSC Ensembl
Mir-544 chr14: 101048676-101048732 [+] UCSC Ensembl
Mir-154-P21 chr14: 101049572-101049631 [+] UCSC Ensembl
Mir-154-P23 chr14: 101052458-101052515 [+] UCSC Ensembl
Mir-154-P24 chr14: 101054316-101054373 [+] UCSC Ensembl
Mir-134 chr14: 101054694-101054754 [+] UCSC Ensembl
Mir-154-P25 chr14: 101055427-101055485 [+] UCSC Ensembl
Mir-154-P6b chr14: 101056233-101056289 [+] UCSC Ensembl
Mir-154-P26 chr14: 101059769-101059826 [+] UCSC Ensembl
Mir-154-P28-v2 chr14: 101060595-101060650 [+] UCSC Ensembl
Mir-154-P28-v1 chr14: 101060596-101060649 [+] UCSC Ensembl
Mir-154-P29 chr14: 101062056-101062115 [+] UCSC Ensembl
Mir-541 chr14: 101064504-101064569 [+] UCSC Ensembl
Mir-154-P30 chr14: 101065314-101065367 [+] UCSC Ensembl
Mir-154-P31 chr14: 101065465-101065519 [+] UCSC Ensembl
Mir-154-P32 chr14: 101065606-101065661 [+] UCSC Ensembl
Mir-154-P33 chr14: 101065925-101065981 [+] UCSC Ensembl
Mir-154-P34 chr14: 101066731-101066786 [+] UCSC Ensembl

Seed

UCAUAGA

Precursor
(pre-Mir +30nt flank)

AGAGCCCAGUCCUUCUUUGGUAUUUAAAACGUGGAUAUUCCUUCUAUGUUUACGUGAUUCCUGGUUAAUCAUAGAGGAAAAUCCAUGUUUUCAGUAUCAAAUGCUGCUUUGGAAAUGU

Get precursor sequence

Structure

        10          20        30        40        50         
AGAGCCCAGUCCUUCUU--|      U           A     U     U   CGUGAU 
                   UGGUAUU AAAACGUGGAU UUCCU CUAUG UUA      \
                   ACUAUGA UUUUGUACCUA AAGGA GAUAC AAU      U
UGUAAAGGUUUCGUCGUAA^      C           A     -     U   UGGUCC 
      110       100        90        80         70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-376-P4_5p*

mirBase accession

MIMAT0022923

Sequence

0- GUGGAUAUUCCUUCUAUGUUUA -22

Get sequence

Proposed targets

TargetScanVert: hsa-miR-376b-5p
miRDB: MIMAT0022923

Mature sequence

Hsa-Mir-376-P4_3p

mirBase accession

MIMAT0002172

Sequence

37- AUCAUAGAGGAAAAUCCAUGU -58

Get sequence

Proposed targets

microrna.org: MIMAT0002172
TargetScanVert: hsa-miR-376b-3p
miRDB: MIMAT0002172