MirGeneDB 2.1
MirGeneDB ID

Hsa-Mir-154-P29

Family name MIR-154 (all species)
Seed UGGUAGA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-1193
Paralogues Hsa-Mir-154-P1  Hsa-Mir-154-P2-v1  Hsa-Mir-154-P2-v2  Hsa-Mir-154-P3a-v1  Hsa-Mir-154-P3a-v2  Hsa-Mir-154-P3b  Hsa-Mir-154-P4a  Hsa-Mir-154-P4b  Hsa-Mir-154-P5  Hsa-Mir-154-P6  Hsa-Mir-154-P7  Hsa-Mir-154-P8  Hsa-Mir-154-P9  Hsa-Mir-154-P10  Hsa-Mir-154-P12  Hsa-Mir-154-P13-v1  Hsa-Mir-154-P13-v2  Hsa-Mir-154-P14  Hsa-Mir-154-P15  Hsa-Mir-154-P16  Hsa-Mir-154-P17  Hsa-Mir-154-P18  Hsa-Mir-154-P19  Hsa-Mir-154-P20-v1  Hsa-Mir-154-P20-v2  Hsa-Mir-154-P21  Hsa-Mir-154-P22  Hsa-Mir-154-P23  Hsa-Mir-154-P24  Hsa-Mir-154-P25  Hsa-Mir-154-P26  Hsa-Mir-154-P27  Hsa-Mir-154-P28a  Hsa-Mir-154-P28b  Hsa-Mir-154-P30  Hsa-Mir-154-P36 
Orthologues Bta-Mir-154-P29  Cfa-Mir-154-P29  Cpo-Mir-154-P29  Dno-Mir-154-P29  Ete-Mir-154-P29  Mml-Mir-154-P29  Mmu-Mir-154-P29-v1  Mmu-Mir-154-P29-v2  Rno-Mir-154-P29-v1  Rno-Mir-154-P29-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)		 chr14: 101030064-101030120 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-154-P29)		 Mir-154-P7 chr14: 101022071-101022129 [+] UCSC Ensembl
Mir-154-P13-v2 chr14: 101023339-101023396 [+] UCSC Ensembl
Mir-154-P13-v1 chr14: 101023340-101023395 [+] UCSC Ensembl
Mir-154-P2-v1 chr14: 101023799-101023853 [+] UCSC Ensembl
Mir-154-P2-v2 chr14: 101023800-101023852 [+] UCSC Ensembl
Mir-154-P8 chr14: 101025020-101025076 [+] UCSC Ensembl
Mir-154-P30 chr14: 101025585-101025640 [+] UCSC Ensembl
Mir-154-P3a-v2 chr14: 101025747-101025802 [+] UCSC Ensembl
Mir-154-P3a-v1 chr14: 101025747-101025802 [+] UCSC Ensembl
Mir-154-P26 chr14: 101026035-101026092 [+] UCSC Ensembl
Mir-154-P4a chr14: 101026796-101026855 [+] UCSC Ensembl
Mir-154-P4b chr14: 101027113-101027172 [+] UCSC Ensembl
Mir-154-P18 chr14: 101029648-101029703 [+] UCSC Ensembl
Mir-154-P29 chr14: 101030064-101030120 [+] UCSC Ensembl
Mir-154-P22 chr14: 101031997-101032054 [+] UCSC Ensembl
Mir-154-P19 chr14: 101033768-101033825 [+] UCSC Ensembl
Mir-376-P4 chr14: 101039695-101039752 [+] UCSC Ensembl
Mir-376-P3 chr14: 101040081-101040138 [+] UCSC Ensembl
Mir-154-P23 chr14: 101040234-101040289 [+] UCSC Ensembl
Mir-376-P2 chr14: 101040460-101040517 [+] UCSC Ensembl
Mir-376-P1 chr14: 101040788-101040845 [+] UCSC Ensembl
Mir-154-P28a chr14: 101042991-101043050 [+] UCSC Ensembl
Mir-154-P28b chr14: 101044212-101044271 [+] UCSC Ensembl
Mir-154-P9 chr14: 101045927-101045989 [+] UCSC Ensembl
Mir-154-P17 chr14: 101046469-101046526 [+] UCSC Ensembl
Mir-154-P21 chr14: 101047329-101047392 [+] UCSC Ensembl
Mir-154-P27 chr14: 101047911-101047969 [+] UCSC Ensembl
Mir-544 chr14: 101048676-101048732 [+] UCSC Ensembl
Mir-154-P24 chr14: 101049572-101049631 [+] UCSC Ensembl
Mir-154-P16 chr14: 101052458-101052515 [+] UCSC Ensembl
Mir-154-P10 chr14: 101054316-101054373 [+] UCSC Ensembl
Mir-134 chr14: 101054694-101054754 [+] UCSC Ensembl
Mir-154-P15 chr14: 101055427-101055485 [+] UCSC Ensembl
Mir-154-P3b chr14: 101056233-101056289 [+] UCSC Ensembl
Mir-154-P1 chr14: 101059769-101059826 [+] UCSC Ensembl
Mir-154-P20-v2 chr14: 101060595-101060650 [+] UCSC Ensembl
Mir-154-P20-v1 chr14: 101060596-101060649 [+] UCSC Ensembl
Mir-154-P6 chr14: 101062056-101062115 [+] UCSC Ensembl
Mir-541 chr14: 101064504-101064569 [+] UCSC Ensembl
Mir-154-P36 chr14: 101065314-101065367 [+] UCSC Ensembl
Mir-154-P14 chr14: 101065465-101065519 [+] UCSC Ensembl
Mir-154-P5 chr14: 101065606-101065661 [+] UCSC Ensembl
Mir-154-P12 chr14: 101065925-101065981 [+] UCSC Ensembl
Mir-154-P25 chr14: 101066731-101066786 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCAUCUGCUCUCCAGGGUAGCUGAGGGGAUGGUAGACCGGUGACGUGCACUUCAUUUACGAUGUAGGUCACCCGUUUGACUAUCCACCAGCGCCCGGUCCAUCUGUGGGAUGACA
Get precursor sequence
Structure
        10           20        30         40        50       
UGCCAUCUGCUCUCCAG---| UA    AGG       -    C      G    CUUCA 
                    GG  GCUG   GGAUGGU AGAC GGUGAC UGCA     U
                    CC  CGAC   CCUAUCA UUUG CCACUG AUGU     U
ACAGUAGGGUGUCUACCUGG^ CG    CA-       G    C      G    AGCAU 
     110       100        90         80        70        60
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut -3 on the 5p arm in human but this not accompanied by an appropriate 3p read. This shift is seen only in human.
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Mature sequence

Hsa-Mir-154-P29_5p
mirBase accessionMIMAT0015049
Sequence 
0- AUGGUAGACCGGUGACGUGCA -21
Get sequence
Proposed targets microrna.org: MIMAT0015049
TargetMiner: hsa-miR-1193
miRDB: MIMAT0015049
Co-mature sequence

Hsa-Mir-154-P29_3p
mirBase accessionNone
Sequence 
35- UAGGUCACCCGUUUGACUAUCC -57
Get sequence