MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-31-P2a

Family name MIR-31 (all species)
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-31-P1  Gpa-Mir-31-P2b 
Orthologues Aae-Mir-31  Aca-Mir-31  Aga-Mir-31  Agr-Mir-31  Ami-Mir-31  Asu-Mir-31  Ava-Mir-31  Bfl-Mir-31  Bge-Mir-31  Bla-Mir-31  Bpl-Mir-31  Bta-Mir-31  Cbr-Mir-31  Cel-Mir-31  Cfa-Mir-31  Cin-Mir-31  Cja-Mir-31  Cli-Mir-31  Cmi-Mir-31  Cpi-Mir-31  Cpo-Mir-31  Cte-Mir-31  Dan-Mir-31-P2  Dgr-Mir-31  Dlo-Mir-31  Dma-Mir-31  Dme-Mir-31-P2  Dmo-Mir-31-P2  Dno-Mir-31  Dpu-Mir-31  Dre-Mir-31  Dsi-Mir-31-P2  Dya-Mir-31-P2  Eba-Mir-31  Ebu-Mir-31  Eca-Mir-31  Efe-Mir-31  Egr-Mir-31  Esc-Mir-31  Ete-Mir-31  Gga-Mir-31  Gmo-Mir-31  Gsa-Mir-31  Hme-Mir-31  Hmi-Mir-31  Hru-Mir-31  Hsa-Mir-31  Isc-Mir-31  Laf-Mir-31  Lch-Mir-31  Lgi-Mir-31  Llo-Mir-31  Mal-Mir-31  Mdo-Mir-31  Mgi-Mir-31  Mml-Mir-31  Mmr-Mir-31  Mmu-Mir-31  Mom-Mir-31  Mun-Mir-31  Neu-Mir-31  Npo-Mir-31  Oan-Mir-31  Obi-Mir-31  Ocu-Mir-31  Ofu-Mir-31  Ovu-Mir-31  Pab-Mir-31  Pau-Mir-31  Pbv-Mir-31  Pca-Mir-31  Pdu-Mir-31  Pfl-Mir-31  Pve-Mir-31  Rno-Mir-31  Rph-Mir-31  Sha-Mir-31  Sko-Mir-31  Sma-Mir-31  Snu-Mir-31  Spt-Mir-31  Spu-Mir-31  Sro-Mir-31  Sto-Mir-31  Tca-Mir-31  Tgu-Mir-31  Tni-Mir-31  War-Mir-31  Xbo-Mir-31  Xtr-Mir-31 
Node of Origin (locus) G. pallidipes
Node of Origin (family) Bilateria
Genome context
(GpalI1)		 Scaffold133: 89437-89510 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-31-P2a)		 Mir-31-P2a Scaffold133: 89437-89510 [+] Ensembl
Mir-31-P2b Scaffold133: 89437-89510 [+] Ensembl
Seed GGCAAGA
Precursor
(pre-Mir +30nt flank)		 
AGAAACCUUAUUAGAAACGAUUAUGGAAUUUGGCAAGAUGUCGGAAUAGCUGAAAAUUACAAUAAUCUAUUUUACAUAUAACGGCUAUGCCUCAUCUAGUCAAUUGCCAGUAAUUGAAAAUGCAGCAAAUUUCU
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Structure
        10         20         30        40        50        60       
AGAAACCUUAUUAGAAA-      -|  AAU     A     UC  A       AAAAUUACAAUAAU 
                  CGAUUA UGG   UUGGC AGAUG  GG AUAGCUG              \
                  GUUAAU ACC   AACUG UCUAC  CC UAUCGGC              C
UCUUUAAACGACGUAAAA      G^  GUU     A     U-  G       AAUAUACAUUUUAU 
  130       120       110       100         90        80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
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Mature sequence

Gpa-Mir-31-P2a_5p
mirBase accessionNone
Sequence 
0- UGGCAAGAUGUCGGAAUAGCUGA -23
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Star sequence

Gpa-Mir-31-P2a_3p* (predicted)
mirBase accessionNone
Sequence 
52- GGCUAUGCCUCAUCUAGUCAAU -74
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