MirGeneDB 3.0

MirGeneDB ID

Ete-Mir-2355

Family name MIR-2355 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-2355  Cfa-Mir-2355  Cja-Mir-2355  Cpo-Mir-2355  Dno-Mir-2355  Hsa-Mir-2355  Laf-Mir-2355  Mml-Mir-2355  Mmr-Mir-2355  Ocu-Mir-2355  Pab-Mir-2355 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980302: 33329502-33329568 [-] UCSC
Seed UCGUGAG
Precursor
(pre-Mir +30nt flank)
UGCAUGGAAAAUAACAUUGUCAGCCGUGUCAUCGUGAGAGACAAUGGACAAUAUGCUAUGAUAAUUGUAUGGCAUUGUCCUUGGUGUUUGGCGAUAGUAUUGCUGACGUUAUCCCUCUCGUACAUGU
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Structure
        10          20        30        40        50        60   
UGCAUGGAAAAUAACAU--|      C   UC     G   G  AAU       AUGCUAUGAU 
                   UGUCAGC GUG  AUCGU AGA AC   GGACAAU          \
                   GCAGUCG UAU  UAGCG UUU UG   CCUGUUA          A
UGUACAUGCUCUCCCUAUU^      U   GA     G   G  GUU       CGGUAUGUUA 
     120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ete-Mir-2355_5p (predicted)

mirBase accessionNone
Sequence
0- AUCGUGAGAGACAAUGGACAAU -22
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Star sequence

Ete-Mir-2355_3p* (predicted)

mirBase accessionNone
Sequence
45- UGUCCUUGGUGUUUGGCGAUAG -67
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