MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-29-P1j

Family name MIR-29 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-29-P1i  Efe-Mir-29-P2k  Efe-Mir-29-P2l 
Orthologues Aae-Mir-29-P1  Aga-Mir-29-P1  Agr-Mir-29-P1  Asu-Mir-29-P1  Bfl-Mir-29-P1  Bla-Mir-29-P1  Cbr-Mir-29-P1  Cel-Mir-29-P1  Cin-Mir-29-o1  Csc-Mir-29-P1  Cte-Mir-29-P1  Dan-Mir-29-P1  Dgr-Mir-29-P1  Dlo-Mir-29-P1  Dma-Mir-29-P1  Dme-Mir-29-P1  Dmo-Mir-29-P1  Dpu-Mir-29-P1  Dsi-Mir-29-P1  Dya-Mir-29-P1  Eba-Mir-29-P1  Esc-Mir-29-P1  Gpa-Mir-29-P1  Gsp-Mir-29  Hme-Mir-29-P1  Hru-Mir-29-P1  Isc-Mir-29-P1  Lhy-Mir-29-P1  Llo-Mir-29-P1  Mgi-Mir-29-P1  Mom-Mir-29-P1  Npo-Mir-29-P1  Obi-Mir-29-P1  Ofu-Mir-29-P1  Ovu-Mir-29-P1  Pau-Mir-29-P1  Pcr-Mir-29-P1  Pdu-Mir-29-P1  Pfl-Mir-29-P1  Pmi-Mir-29-P1  Pve-Mir-29-P1  Rph-Mir-29-P1  Sko-Mir-29-P1  Snu-Mir-29-P1  Spu-Mir-29-P1  Tca-Mir-29-P1  Tur-Mir-29-P1  War-Mir-29-P1  Xbo-Mir-29-P1 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.454037: 307-366 [-]
Seed AGCACCA
Precursor
(pre-Mir +30nt flank)		 
AUUGGAGGAUUGGUUUAAUCUUCUGGAAACCUGCUUUCCUCUGGUGACUGGAUUAGAACGACUUUUUCUAGCACCAGUUGAAAUCAGCUUUCCCGUCGAUCUAAAAUCGGCUACAUUAGG
Get precursor sequence
Structure
        10           20        30        40        50         
AUUGGAGGAUUGGUUUA---|  UUCU     C   C    CU      A     UUAGAA 
                    AUC    GGAAA CUG UUUC  CUGGUG CUGGA      C
                    UAG    CCUUU GAC AAAG  GACCAC GAUCU      G
GGAUUACAUCGGCUAAAAUC^  CUGC     C   U    UU      -     UUUUCA 
.       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Efe-Mir-29-P1j_5p* (predicted)
mirBase accessionNone
Sequence 
0- CUGCUUUCCUCUGGUGACUGGA -22
Get sequence
Mature sequence

Efe-Mir-29-P1j_3p
mirBase accessionNone
Sequence 
38- UAGCACCAGUUGAAAUCAGCUU -60
Get sequence