MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-969

Family name MIR-969 (all species)
Seed AGUUCCA
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues
Orthologues Dan-Mir-969  Dme-Mir-969  Dmo-Mir-969  Dsi-Mir-969 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
X: 16642342-16642403 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-969)
Mir-210-v1 X: 16646342-16646400 [+] UCSC Ensembl
Mir-210-v2 X: 16646342-16646400 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGGUAUCCCCAAACCUCUGUCCUACGUCCGAGUUCCACUAAGCAAGUUUUGAGAUCGUUUUAAAAACAAAAACUUGACACGUUGAGCUCGUUUGUGGGAUGGUCUACCGCAAUUCGAAAGA
Get precursor sequence
Structure
        10          20        30        40        50        60
GGGGUAUCCCCAAACCU--|         UC       C  UAAG        GAGAUCGU 
                   CUGUCCUACG  CGAGUUC AC    CAAGUUUU        U
                   GGUAGGGUGU  GCUCGAG UG    GUUCAAAA        U
AGAAAGCUUAACGCCAUCU^         UU       U  CACA        ACAAAAAU 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Wh
Mature sequence

Dya-Mir-969_5p

mirBase accessionNone
Sequence
0- GAGUUCCACUAAGCAAGUUUU -21
Get sequence
Co-mature sequence

Dya-Mir-969_3p

mirBase accessionNone
Sequence
41- AACUUGACACGUUGAGCUCGU -62
Get sequence