MirGeneDB 2.1

MirGeneDB ID

Dmo-Mir-969

Family name MIR-969 (all species)
Seed ACUUGAC
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues Dan-Mir-969  Dme-Mir-969  Dsi-Mir-969  Dya-Mir-969 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Dmoj_caf1)
scaffold_6473: 13724331-13724390 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-969)
Mir-210-v1 scaffold_6473: 13732395-13732453 [+] Ensembl
Mir-210-v2 scaffold_6473: 13732395-13732453 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACCAUAUCCACAUUUGGCUGUCCUACGAGCGAGUUCCACUAAUCAAGUUUUGAGUGUUCGAAAAUCAAAAACUUGACACGUUGAGCUCGUCUGUGUGGCACAAGUUCAACAAAAGCAACA
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Structure
        10          20        30        40        50         
ACCAUAUCCACAUUUGGC--|   C    AG       C  UAA         GAGUGUU 
                    UGUC UACG  CGAGUUC AC   UCAAGUUUU       C
                    ACGG GUGU  GCUCGAG UG   AGUUCAAAA       G
ACAACGAAAACAACUUGAAC^   U    CU       U  CAC         ACUAAAA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Em Fe Ma Ma
Star sequence

Dmo-Mir-969_5p*

mirBase accessionNone
Sequence
0- GAGUUCCACUAAUCAAGUUUU -21
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Mature sequence

Dmo-Mir-969_3p

mirBase accessionNone
Sequence
39- AACUUGACACGUUGAGCUCGU -60
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