MirGeneDB 2.1

MirGeneDB ID

Dsi-Mir-969

Family name MIR-969 (all species)
Seed AGUUCCA
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-969
Paralogues
Orthologues Dan-Mir-969  Dme-Mir-969  Dmo-Mir-969  Dya-Mir-969 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)
X: 17106556-17106617 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-969)
Mir-969 X: 17106556-17106617 [+] UCSC Ensembl
Mir-210-v1 X: 17110595-17110653 [+] UCSC Ensembl
Mir-210-v2 X: 17110595-17110653 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGGAAUCCCCAAGUCUCUGUCCUACGUCCGAGUUCCACUAAGCAAGUUUUGAGAUCGUUUUAAAAACAAAAACUUGACACGUUGAGCUCGUUCGUGGGAUGGACUACUGCAAUUCAAAAUC
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Structure
        10          20        30        40        50        60
GGGGAAUCCCCAAGUCU--|         UC       C  UAAG        GAGAUCGU 
                   CUGUCCUACG  CGAGUUC AC    CAAGUUUU        U
                   GGUAGGGUGC  GCUCGAG UG    GUUCAAAA        U
CUAAAACUUAACGUCAUCA^         UU       U  CACA        ACAAAAAU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Wh
Mature sequence

Dsi-Mir-969_5p

mirBase accessionMIMAT0012479
Sequence
0- GAGUUCCACUAAGCAAGUUUU -21
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Co-mature sequence

Dsi-Mir-969_3p

mirBase accessionMIMAT0012480
Sequence
41- AACUUGACACGUUGAGCUCGU -62
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