Mir-977

MirGeneDB ID

Dsi-Mir-977

Family name

MIR-977 (all species)

Species

Fruit fly (Drosophila simulans)

MiRBase ID

dsi-mir-977

Paralogues

Orthologues

Dan-Mir-977 Dme-Mir-977 Dmo-Mir-977 Dya-Mir-977

Node of Origin (locus)

Drosophila

Node of Origin (family)

Drosophila

Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)

X: 18331071-18331133 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-977)

Mir-972 X: 18322964-18323019 [+] UCSC Ensembl
Mir-9369 X: 18323144-18323204 [+] UCSC Ensembl
Mir-973 X: 18323323-18323387 [+] UCSC Ensembl
Mir-974 X: 18323461-18323522 [+] UCSC Ensembl
Mir-975 X: 18330806-18330866 [+] UCSC Ensembl
Mir-976 X: 18330933-18330991 [+] UCSC Ensembl
Mir-977 X: 18331071-18331133 [+] UCSC Ensembl
Mir-978-v1 X: 18333231-18333293 [+] UCSC Ensembl
Mir-978-v2 X: 18333232-18333292 [+] UCSC Ensembl

Seed

GAGAUAU

Precursor
(pre-Mir +30nt flank)

AGUGCCGAAAAUGCAUCCCAAGGUAUGGUUUAGAUAACUCGAAUAUCACAUUUUCAGUGUUCGAUAUCUGAUGAGAUAUUCACGUUGUCUAAACCAUGGUUUGUUUUUGAAAACUACUCAGAU

Get precursor sequence

Structure

        10          20        30        40        50        60 
AGUGCCGAAAAUGCAUCC--|   G               UC       A    UUCAGUGU 
                    CAAG UAUGGUUUAGAUAAC  GAAUAUC CAUU        \
                    GUUU GUACCAAAUCUGUUG  CUUAUAG GUAG        U
UAGACUCAUCAAAAGUUUUU^   G               CA       A    UCUAUAGC 
 120       110       100        90        80        70