| MirGeneDB ID | Dgr-Mir-1996 |
|---|---|
| Family name | MIR-1996 (all species) |
| Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cte-Mir-1996 Cte-Mir-1996-as Efe-Mir-1996-P1 Efe-Mir-1996-P2 Efe-Mir-1996-P3 Pdu-Mir-1996-o1 Pdu-Mir-1996-o2 Snu-Mir-1996 |
| Node of Origin (locus) | Sipuncula + Pleistoannelida |
| Node of Origin (family) | Sipuncula + Pleistoannelida |
| Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000012.1: 1357814-1357873 [+] |
| Clustered miRNAs (< 50kb from Mir-1996) |
Mir-33
CAJFCJ010000012.1: 1333134-1333195 [+]
Mir-1996 CAJFCJ010000012.1: 1357814-1357873 [+] |
| Seed | UCAAGUG |
| Precursor (pre-Mir +30nt flank) |
UAAUUAUAAUAAAUUUAUAGAGCUUGGAGUAUCAAGUGAGGUCAGUGCUGUUGAGAAAUUCAGACAACGGCUUUGCUCUCUACUUGAAACUUCCAGUUCUUUCUUGCACUUAAACGCCUUGet precursor sequence |
| Structure | 10 20 30 40 50 UAAUUAUAAUAAAUUUAU-- U A -| GU U GAGAAA AGAGCU GGAGU UCAAGU GAG CAG GCUGUU \ UCUUGA CUUCA AGUUCA CUC GUU CGGCAA U UUCCGCAAAUUCACGUUCUU C A U^ UC U CAGACU . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Dgr-Mir-1996_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AUCAAGUGAGGUCAGUGCUGUU -22
Get sequence
|
| Star sequence | Dgr-Mir-1996_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- CGGCUUUGCUCUCUACUUGAAAC -60
Get sequence
|
