MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-1996-P2

Family name MIR-1996 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-1996-P1  Efe-Mir-1996-P3 
Orthologues Cte-Mir-1996  Dgr-Mir-1996  Pdu-Mir-1996-o2  Snu-Mir-1996 
Node of Origin (locus) E. fetida
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(Efe_combined)		 Efet.01.40739: 1521-1580 [+]
Seed UCAAGUG
Precursor
(pre-Mir +30nt flank)		 
AAGGAGGGAACUAACCAGCUCGUUGAGGGUUUCAAGUGAGGUCAGUGCUGCUCGAUUUUUUUCAGCAGCUGUACUGUCUUCGUUUGAUAUCAGCUGCCGAGCGUUUUCGUCGUAAUUCAU
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Structure
        10         20         30        40        50         
AAGGAGGGAACUAACCA-     UUGAG-|  U          U      U   CGAUUU 
                  GCUCG      GGU UCAAGUGAGG CAGUGC GCU      U
                  CGAGC      CUA AGUUUGCUUC GUCAUG CGA      U
UACUUAAUGCUGCUUUUG     CGUCGA^  U          U      U   CGACUU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Efe-Mir-1996-P2_5p
mirBase accessionNone
Sequence 
0- UUCAAGUGAGGUCAGUGCUGCU -22
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Star sequence

Efe-Mir-1996-P2_3p*
mirBase accessionNone
Sequence 
38- CUGUACUGUCUUCGUUUGAUAU -60
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