MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-34-P19c

Family name MIR-34 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-34-P19a  Csc-Mir-34-P19b  Csc-Mir-34-P20 
Orthologues Aae-Mir-34  Aga-Mir-34  Agr-Mir-34  Asu-Mir-34  Bge-Mir-34  Cbr-Mir-34  Cel-Mir-34  Cin-Mir-34  Cte-Mir-34  Dan-Mir-34  Dlo-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Efe-Mir-34  Esc-Mir-34  Gpa-Mir-34  Gsp-Mir-34  Hmi-Mir-34  Hru-Mir-34  Isc-Mir-34  Lgi-Mir-34  Lhy-Mir-34  Llo-Mir-34  Mgi-Mir-34  Mom-Mir-34  Npo-Mir-34  Obi-Mir-34  Ofu-Mir-34  Ovu-Mir-34  Pau-Mir-34  Pca-Mir-34  Pdu-Mir-34  Pfl-Mir-34  Pmi-Mir-34  Pve-Mir-34  Rph-Mir-34  Sko-Mir-34  Snu-Mir-34  Spu-Mir-34  Tca-Mir-34  Tur-Mir-34  War-Mir-34 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)		 NW_019384483.1: 589710-589767 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-34-P19c)		 Mir-34-P19c NW_019384483.1: 589710-589767 [-] Ensembl
Mir-277-P18b NW_019384483.1: 591286-591347 [-] Ensembl
Mir-34-P19b NW_019384483.1: 599502-599559 [-] Ensembl
Mir-277-P18a NW_019384483.1: 601078-601139 [-] Ensembl
Mir-317-P18 NW_019384483.1: 602611-602681 [-] Ensembl
Mir-34-P19a NW_019384483.1: 607027-607084 [-] Ensembl
Seed GGCAGUG
Precursor
(pre-Mir +30nt flank)		 
UAAUUUUUUUUACAUAAAAGUGAAUGGUGGUGGCAGUGUGGUUAGCUGGUUGUGAAUGAUGACGACAACCACUAGUCGUACUGCCGCCUUCCUUCGCUCUCUCAUCAUCCACCGUCUC
Get precursor sequence
Structure
        10          20         30        40        50         
UAAUUUUUUUUACAUAAA--|     U  U-            GU   C       GAAUG 
                    AGUGAA GG  GGUGGCAGUGUG  UAG UGGUUGU     \
                    UCGCUU CC  CCGCCGUCAUGC  AUC ACCAACA     A
CUCUGCCACCUACUACUCUC^     -  UU            UG   -       GCAGU 
      110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-34-P19c_5p
mirBase accessionNone
Sequence 
0- UGGCAGUGUGGUUAGCUGGUUGU -23
Get sequence
Star sequence

Csc-Mir-34-P19c_3p*
mirBase accessionNone
Sequence 
36- AACCACUAGUCGUACUGCCGCC -58
Get sequence