| MirGeneDB ID | Cpo-Mir-6715 |
|---|
| Family name |
MIR-6715 (all species) |
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| Seed |
CAAACCA |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bta-Mir-6715
Cfa-Mir-6715
Ete-Mir-6715
Hsa-Mir-6715
Mml-Mir-6715
Mmu-Mir-6715
Ocu-Mir-6715
Rno-Mir-6715
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(cavPor3) |
scaffold_11: 3327782-3327838 [-]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
UUCCGUGGUUGCCUGCACUGGGCUGUGUUCACAGGCACGGCCGGUUUGAGCAUUUUCACUGAAUUGCCAAACCAGGCGUGCCUGUGGCCACAACUCUCACCUGCGCCCGCCGAGUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCCGUGGUUGCCUGCACU--| C UU G - A UUUUC
GGG UGUG CACAGGCACG CC GGUUUG GCA A
CUC ACAC GUGUCCGUGC GG CCAAAC CGU C
UCUGAGCCGCCCGCGUCCACU^ A CG - A - UAAGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Cpo-Mir-6715_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- ACAGGCACGGCCGGUUUGAGCA -22
Get sequence
|
|---|
| Mature sequence |
Cpo-Mir-6715_3p |
| mirBase accession | None |
|---|
| Sequence |
36- CCAAACCAGGCGUGCCUGUGG -57
Get sequence
|
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