MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-320

Family name MIR-320 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-320-P1c  Bta-Mir-320-P1d  Cfa-Mir-320  Cja-Mir-320-P1  Dno-Mir-320  Eca-Mir-320  Ete-Mir-320  Hsa-Mir-320-P1  Hsa-Mir-320-P2a  Hsa-Mir-320-P2b  Hsa-Mir-320-P3  Hsa-Mir-320-P4  Laf-Mir-320  Mml-Mir-320-P1  Mml-Mir-320-P2a  Mml-Mir-320-P2b  Mml-Mir-320-P3  Mml-Mir-320-P4  Mmr-Mir-320-P1a  Mmr-Mir-320-P1b  Mmr-Mir-320-P1c  Mmr-Mir-320-P1d  Mmr-Mir-320-P5  Mmr-Mir-320-P6  Mmr-Mir-320-P7  Mmr-Mir-320-P8  Mmu-Mir-320  Ocu-Mir-320  Pab-Mir-320-P1  Pab-Mir-320-P2a  Pab-Mir-320-P2b  Pab-Mir-320-P3  Pab-Mir-320-P4  Rno-Mir-320 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_1: 59045827-59045880 [-] UCSC
Seed AAAGCUG
Precursor
(pre-Mir +30nt flank)		 
UAUUUAUUAGGCGGCGCUUCGCUGCCCUCCGCCUUCUCUUCCCGGUUCUUCCCGGAGUCGGGAAAAGCUGGGUUGAGAGGGCGAAAAAAGGUGAGAUGGAGGAGGGUCUUUGCC
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Structure
        10          20        30        40        50      
UAUUUAUUAGGCGGCGC--|     GCCCUC         UU       C    CGG 
                   UUCGCU      CGCCUUCUC  CCCGGUU UUCC   A
                   GAGUGG      GCGGGAGAG  GGGUCGA AAGG   G
CCGUUUCUGGGAGGAGGUA^     AAAAAA         UU       A    GCU 
  110       100        90        80        70        60
Deep sequencing
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CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced.
3' NTU No
MotifsNo
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-320_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCCUUCUCUUCCCGGUUCUUCC -22
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Mature sequence

Cpo-Mir-320_3p
mirBase accessionNone
Sequence 
32- AAAAGCUGGGUUGAGAGGGCGA -54
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