Mir-320-P2a

MirGeneDB ID

Mml-Mir-320-P2a

Family name

MIR-320 (all species)

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

Paralogues

Mml-Mir-320-P1 Mml-Mir-320-P2b Mml-Mir-320-P3 Mml-Mir-320-P4

Orthologues

Cfa-Mir-320 Cpo-Mir-320 Dno-Mir-320 Eca-Mir-320 Ete-Mir-320 Hsa-Mir-320-P2a Laf-Mir-320 Mmu-Mir-320 Ocu-Mir-320 Pab-Mir-320-P2a Rno-Mir-320

Node of Origin (locus)

Catarrhini

Node of Origin (family)

Eutheria

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014336.1: 107587464-107587517 [-] UCSC Ensembl

Seed

AAAGCUG

Precursor
(pre-Mir +30nt flank)

UUGGAAACUAGUGUUUCAAAAAUAAAUUAAUCCCUCUCUUUCUAGUUCUUCCUAGAGUGAGGAAAAGCUGGGUUGAGAGGGCAAAUAAAUUAACUAAUUAAUUAACUAAUUAAA

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Structure

        10        20        30          40        50      
UUGGAAACUAGUGUUUCAAAAAUAAAUUAAU--|      UU       C    UAG 
                                 CCCUCUC  UCUAGUU UUCC   A
                                 GGGAGAG  GGGUCGA AAGG   G
AAAUUAAUCAAUUAAUUAAUCAAUUAAAUAAAC^      UU       A    AGU 
  110       100        90        80        70        60

Deep sequencing

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Comment

As a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced.

3' NTU

Motifs

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-320-P2a_5p* (predicted)

mirBase accession

None

Sequence

0- UCCCUCUCUUUCUAGUUCUUCC -22

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Mature sequence

Mml-Mir-320-P2a_3p

mirBase accession

None

Sequence

32- AAAAGCUGGGUUGAGAGGGCAA -54

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