MirGeneDB 3.0
MirGeneDB ID

Cmi-Let-7-P2c4

Family name LET-7 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Let-7-P1d  Cmi-Let-7-P2a1  Cmi-Let-7-P2a2  Cmi-Let-7-P2a4  Cmi-Let-7-P2b2  Cmi-Let-7-P2b4  Cmi-Let-7-P2c1  Cmi-Let-7-P2c2  Cmi-Let-7-P2c3 
Orthologues Aae-Let-7  Aga-Let-7  Agr-Let-7  Bge-Let-7  Bko-Let-7  Bpl-Let-7  Cte-Let-7  Dan-Let-7  Dlo-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Eba-Let-7  Egr-Let-7  Esc-Let-7  Gpa-Let-7  Gsa-Let-7  Gsp-Let-7  Hme-Let-7  Hmi-Let-7  Hru-Let-7  Isc-Let-7  Lan-Let-7  Lch-Let-7-P2c4  Lgi-Let-7  Lhy-Let-7  Llo-Let-7  Mgi-Let-7  Mom-Let-7  Mun-Let-7-P2c4  Npo-Let-7  Obi-Let-7  Ofu-Let-7  Ovu-Let-7  Pau-Let-7  Pca-Let-7  Pcr-Let-7  Pdu-Let-7  Pfl-Let-7  Ple-Let-7  Pmi-Let-7  Pve-Let-7  Rph-Let-7  Sko-Let-7  Sma-Let-7  Sne-Let-7  Snu-Let-7  Spu-Let-7  Sro-Let-7  Tca-Let-7  Tur-Let-7  War-Let-7  Xbo-Let-7  Xla-Let-7-P2c4  Xtr-Let-7-P2c4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635924.1: 186817-186889 [-] UCSC Ensembl
Seed GAGGUAG
Precursor
(pre-Mir +30nt flank)		 
GGUGUAGGAUCGAGCUGUCAGUCCACUGCCAGAGGUAGUAGUUUGUGUAGUUUAAAAGGUUGUGACACCGCCUGGGAGAUAACUAUACAAUCUACUGCCUUGCCAGUGCUGCUUCAGAGCUACAGGACGAUGG
Get precursor sequence
Structure
        10            20        30        40        50        60      
GGUGUAGGAUCGAGCUGU----|  UC     CCA          U          UAAAAGGUUGUGA 
                      CAG  CACUG   GAGGUAGUAG UUGUGUAGUU             C
                      GUC  GUGAC   UUCCGUCAUC AACAUAUCAA             A
GGUAGCAGGACAUCGAGACUUC^  --     CG-          U          UAGAGGGUCCGCC 
 130       120       110          100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Let-7-P2c4_5p
mirBase accessionNone
Sequence 
0- AGAGGUAGUAGUUUGUGUAGUU -22
Get sequence
Star sequence

Cmi-Let-7-P2c4_3p*
mirBase accessionNone
Sequence 
52- CUAUACAAUCUACUGCCUUGC -73
Get sequence