MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-34-P6

Family name MIR-34 (all species)
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-34-P5  Bla-Mir-34-P7  Bla-Mir-34-P8 
Orthologues Aae-Mir-34  Aga-Mir-34  Agr-Mir-34  Asu-Mir-34  Bfl-Mir-34-P6a  Bfl-Mir-34-P6b  Bge-Mir-34  Cbr-Mir-34  Cel-Mir-34  Cin-Mir-34  Cte-Mir-34  Dan-Mir-34  Dlo-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Efe-Mir-34  Esc-Mir-34  Gpa-Mir-34  Gsp-Mir-34  Hmi-Mir-34  Hru-Mir-34  Isc-Mir-34  Lgi-Mir-34  Lhy-Mir-34  Llo-Mir-34  Mgi-Mir-34  Mom-Mir-34  Npo-Mir-34  Obi-Mir-34  Ofu-Mir-34  Ovu-Mir-34  Pau-Mir-34  Pca-Mir-34  Pdu-Mir-34  Pfl-Mir-34  Pmi-Mir-34  Pve-Mir-34  Rph-Mir-34  Sko-Mir-34  Snu-Mir-34  Spu-Mir-34  Tca-Mir-34  Tur-Mir-34  War-Mir-34 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 Sc0000034: 210892-210948 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-34-P6)		 Mir-34-P7 Sc0000034: 200473-200534 [-] Ensembl
Mir-34-P6 Sc0000034: 210892-210948 [-] Ensembl
Mir-34-P5 Sc0000034: 211239-211300 [-] Ensembl
Seed GCCACUG
Precursor
(pre-Mir +30nt flank)		 
AUCGCCCGUCUCGUUCCCUGUGUGCUGCUGUGGCAGUGUGGAUAGCUGGCCGUUUUCAUCACAACAGCCACUGUACACACUCCCGUAAUAACACACGGAAUAUCUACUCUCUGCUAU
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Structure
        10          20        30        40        50        
AUCGCCCGUCUCGUUCC--|      C  C     C      G    C    C  UUUC 
                   CUGUGUG UG UGUGG AGUGUG AUAG UGGC GU    A
                   GGCACAC AU AUGCC UCACAC UGUC ACCG CA    U
UAUCGUCUCUCAUCUAUAA^      A  A     C      A    -    A  ACAC 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ad Em Em Em Em
Star sequence

Bla-Mir-34-P6_5p*
mirBase accessionNone
Sequence 
0- UGGCAGUGUGGAUAGCUGGCCGU -23
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Mature sequence

Bla-Mir-34-P6_3p
mirBase accessionNone
Sequence 
35- AGCCACUGUACACACUCCCGUA -57
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