MirGeneDB 3.0

6 Xenopus tropicalis microRNA genes with seed AGCAGCA (all species)
Sort by genome coordinates Motifs Tissue expression
- +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC An Br Em Em He Ve
Xtr-Mir-15-P1a xtr-mir-15a MIR-15 AGCAGCA MIMAT0003560 None chr2 146575536 146575594 - Gnathostomata Olfactores No 1
Xtr-Mir-15-P1b xtr-mir-15b MIR-15 AGCAGCA MIMAT0003561 None chr5 103362208 103362267 - Gnathostomata Olfactores No
Xtr-Mir-15-P1c xtr-mir-15c MIR-15 AGCAGCA MIMAT0003651 None chr8 47368668 47368725 - Gnathostomata Olfactores No
Xtr-Mir-15-P2a xtr-mir-16a MIR-15 AGCAGCA MIMAT0003563 None chr2 146575403 146575458 - Gnathostomata Olfactores No 1
Xtr-Mir-15-P2b xtr-mir-16b MIR-15 AGCAGCA MIMAT0003668 None chr5 103362049 103362108 - Gnathostomata Olfactores Unknown 1
Xtr-Mir-15-P2c xtr-mir-16c MIR-15 AGCAGCA MIMAT0003562 None chr8 47366675 47366740 - Gnathostomata Olfactores No

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix