MirGeneDB 3.0
12 Ruditapes philippinarum microRNA genes with seed AUCACAG (all species)
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MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Ru Ru Ru Ru Ru Ru Ru Ru Ru Ru Ru Ru Ru Ru Ru
Rph-Mir-2-P12 None MIR-2 AUCACAG None None CM018536.1 47739104 47739161 - Lophotrochozoa Protostomia No 1
Rph-Mir-2-o73 None MIR-2 AUCACAG None None QUSP01001813.1 154868 154926 - R. philippinarum Protostomia No 1
Rph-Mir-2-o72 None MIR-2 AUCACAG None None QUSP01001813.1 155017 155075 - R. philippinarum Protostomia No
Rph-Mir-2-o71 None MIR-2 AUCACAG None None QUSP01002410.1 60139 60197 - R. philippinarum Protostomia No 1
Rph-Mir-2-o70 None MIR-2 AUCACAG None None QUSP01002410.1 60291 60350 - R. philippinarum Protostomia No 1
Rph-Mir-2-o69 None MIR-2 AUCACAG None None QUSP01002410.1 63485 63542 - R. philippinarum Protostomia No
Rph-Mir-2-o68 None MIR-2 AUCACAG None None QUSP01002410.1 64540 64597 - R. philippinarum Protostomia No
Rph-Mir-2-o67 None MIR-2 AUCACAG None None QUSP01002410.1 64738 64796 - R. philippinarum Protostomia No 1 1
Rph-Mir-2-o66 None MIR-2 AUCACAG None None CM018536.1 47737950 47738006 - R. philippinarum Protostomia No 1 1
Rph-Mir-2-o65 None MIR-2 AUCACAG None None CM018536.1 47738240 47738298 - R. philippinarum Protostomia No
Rph-Mir-2-o64 None MIR-2 AUCACAG None None CM018536.1 47738531 47738593 - R. philippinarum Protostomia No 1
Rph-Mir-2-o63 None MIR-2 AUCACAG None None CM018536.1 47738775 47738832 - R. philippinarum Protostomia No

(red - mature/co-mature, blue - star)

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