MirGeneDB 3.0

7 Cavia porcellus microRNA genes with seed AGCAGCA (all species)

						Sort by genome coordinates								Motifs			Tissue expression - +
MirGeneDB ID ▲	MiRBase ID	Family	Seed	5p accession	3p accession	Chromosome	Start	End	Strand	Node of origin (locus)	Node of origin (family)	Iso­miR	3' NTU	UG	UGUG	CNNC	Bl	Bl	Bl	Bl	Oo	Oo	Oo	Oo	To	Wh
Cpo-Mir-15-P1a	cpo-mir-15a	MIR-15	AGCAGCA	MIMAT0046849	MIMAT0046850	scaffold_6	59875535	59875593	-	Gnathostomata	Olfactores		No
Cpo-Mir-15-P1b	cpo-mir-15b	MIR-15	AGCAGCA	MIMAT0046851	MIMAT0046852	scaffold_8	57379064	57379123	+	Gnathostomata	Olfactores		No
Cpo-Mir-15-P1c	cpo-mir-424	MIR-15	AGCAGCA	MIMAT0047243	MIMAT0047244	scaffold_128	2879319	2879377	-	Gnathostomata	Olfactores		No
Cpo-Mir-15-P1d	cpo-mir-497	MIR-15	AGCAGCA	MIMAT0047295	MIMAT0047296	scaffold_61	9616778	9616839	+	Gnathostomata	Olfactores		No			1
Cpo-Mir-15-P2a	cpo-mir-16a	MIR-15	AGCAGCA	MIMAT0046853	MIMAT0046854	scaffold_6	59875390	59875454	-	Gnathostomata	Olfactores		No	1		1
Cpo-Mir-15-P2b	cpo-mir-16b	MIR-15	AGCAGCA	MIMAT0046855	MIMAT0046856	scaffold_8	57379204	57379268	+	Gnathostomata	Olfactores		No			1
Cpo-Mir-15-P2d	cpo-mir-195	MIR-15	AGCAGCA	MIMAT0047076	MIMAT0047077	scaffold_61	9617085	9617145	+	Gnathostomata	Olfactores		No			1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix