MirGeneDB 2.1

20 Branchiostoma lanceolatum microRNA genes with seed UGCGGGG (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Ad Ad Em Em Em Em
Bla-Mir-4872-P8 None MIR-4872 UGCGGGG None None Sc0000763 4854 4911 + B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P9a None MIR-4872 UGCGGGG None None Sc0000763 10207 10263 + B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P9b None MIR-4872 UGCGGGG None None Sc0000763 5661 5717 + B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P9c None MIR-4872 UGCGGGG None None None None None None B. lanceolatum Branchiostoma Unknown
Bla-Mir-4872-P10a None MIR-4872 UGCGGGG None None Sc0000763 6063 6119 + B. lanceolatum Branchiostoma No 1 1 1
Bla-Mir-4872-P10b None MIR-4872 UGCGGGG None None Sc0000763 10414 10470 + B. lanceolatum Branchiostoma No 1 1 1
Bla-Mir-4872-P11a None MIR-4872 UGCGGGG None None Sc0000763 10892 10951 + B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P11b None MIR-4872 UGCGGGG None None Sc0000763 6541 6600 + B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P12 None MIR-4872 UGCGGGG None None Sc0000763 11249 11305 + B. lanceolatum Branchiostoma No 1
Bla-Mir-4872-P13 None MIR-4872 UGCGGGG None None Sc0000763 11455 11511 + B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P26a None MIR-4872 UGCGGGG None None Sc0000044 1579208 1579264 - B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P26b None MIR-4872 UGCGGGG None None Sc0000044 1571716 1571772 - B. lanceolatum Branchiostoma Unknown
Bla-Mir-4872-P26c None MIR-4872 UGCGGGG None None Sc0000044 1575184 1575240 - B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P28 None MIR-4872 UGCGGGG None None Sc0000044 1566732 1566788 - B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P29 None MIR-4872 UGCGGGG None None Sc0000044 1563350 1563406 - B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P30a None MIR-4872 UGCGGGG None None Sc0000044 1563150 1563206 - B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P30b None MIR-4872 UGCGGGG None None Sc0000044 1562950 1563006 - B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P30c None MIR-4872 UGCGGGG None None Sc0000044 1562344 1562400 - B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P31a None MIR-4872 UGCGGGG None None Sc0000044 1562750 1562806 - B. lanceolatum Branchiostoma Unknown 1
Bla-Mir-4872-P31b None MIR-4872 UGCGGGG None None Sc0000044 1561992 1562048 - B. lanceolatum Branchiostoma Unknown 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix