MirGeneDB 3.0

25 microRNA genes with seed AGGAGCU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Cfa-Mir-28 cfa-mir-28 MIR-28 AGGAGCU None MIMAT0006675 chr34 20971517 20971578 + Eutheria Eutheria No 1
Cja-Mir-28 None MIR-28 AGGAGCU None None CM021929.1 11419124 11419185 + Eutheria Eutheria No 1 1
Cpo-Mir-28 cpo-mir-28 MIR-28 AGGAGCU MIMAT0046894 MIMAT0046895 scaffold_7 53348173 53348234 + Eutheria Eutheria No 1 1
Hsa-Mir-28 hsa-mir-28 MIR-28 AGGAGCU MIMAT0000085 MIMAT0004502 chr3 188688794 188688855 + Eutheria Eutheria No 1 1
Laf-Mir-28 None MIR-28 AGGAGCU None None GL010052.1 9163845 9163906 + Eutheria Eutheria No 1
Mmu-Mir-28 mmu-mir-28a MIR-28 AGGAGCU MIMAT0000653 MIMAT0004661 chr16 24827868 24827929 + Eutheria Eutheria No 1 1
Pab-Mir-28 None MIR-28 AGGAGCU None None CM068843.1 198684265 198684326 + Eutheria Eutheria No 1 1
Rno-Mir-28 rno-mir-28 MIR-28 AGGAGCU MIMAT0000800 MIMAT0004716 chr11 79380534 79380595 - Eutheria Eutheria No 1 1
Bta-Mir-708 bta-mir-708 MIR-708 AGGAGCU MIMAT0009367 None NC_037356.1 16596088 16596156 + Eutheria Eutheria No 1
Cfa-Mir-708 cfa-mir-708 MIR-708 AGGAGCU MIMAT0006643 None chr21 19542577 19542645 + Eutheria Eutheria No 1
Cja-Mir-708 None MIR-708 AGGAGCU None None CM021925.1 57852958 57853026 + Eutheria Eutheria Unknown 1
Cpo-Mir-708 cpo-mir-708 MIR-708 AGGAGCU MIMAT0047377 MIMAT0047378 scaffold_40 13990350 13990418 + Eutheria Eutheria No 1
Dno-Mir-708 dno-mir-708 MIR-708 AGGAGCU MIMAT0048006 MIMAT0048007 JH568416 1666120 1666188 + Eutheria Eutheria No 1
Eca-Mir-708 eca-mir-708 MIR-708 AGGAGCU MIMAT0012993 None CM009154.1 67413086 67413154 + Eutheria Eutheria No 1
Ete-Mir-708 None MIR-708 AGGAGCU None None JH980327 7885404 7885472 - Eutheria Eutheria No 1
Hsa-Mir-708 hsa-mir-708 MIR-708 AGGAGCU MIMAT0004926 MIMAT0004927 chr11 79402031 79402099 - Eutheria Eutheria No 1
Laf-Mir-708 None MIR-708 AGGAGCU None None GL010089.1 2376149 2376217 - Eutheria Eutheria Unknown 1
Mml-Mir-708 mml-mir-708 MIR-708 AGGAGCU MIMAT0012785 MIMAT0026952 CM014349.1 72505834 72505902 - Eutheria Eutheria No 1
Mmr-Mir-708 mmr-mir-708 MIR-708 AGGAGCU MIMAT0049137 None CM007665.1 66015105 66015173 + Eutheria Eutheria Unknown 1
Mmu-Mir-708 mmu-mir-708 MIR-708 AGGAGCU MIMAT0004828 MIMAT0003498 chr7 96249450 96249518 + Eutheria Eutheria No 1
Pab-Mir-708 None MIR-708 AGGAGCU None None CM054688.2 81469692 81469760 - Eutheria Eutheria No 1
Rno-Mir-708 rno-mir-708 MIR-708 AGGAGCU MIMAT0005331 MIMAT0005332 chr1 161221256 161221324 + Eutheria Eutheria No 1
Tgu-Mir-2997 tgu-mir-2997 MIR-2997 AGGAGCU MIMAT0014653 MIMAT0014604 20 6160929 6160990 + T. guttata T. guttata No 1
Obi-Mir-12578 V None MIR-12578 AGGAGCU None None KQ418719 174845 174904 - Octopus Octopus 2 No 1
Ovu-Mir-12578 V None MIR-12578 AGGAGCU None None RXHP01012977.1 2440 2499 - Octopus Octopus 2 No 1

(red - mature/co-mature, blue - star)

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