MirGeneDB 3.0

MirGeneDB ID

Cpo-Mir-708

Family name MIR-708 (all species)
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-708
Paralogues
Orthologues Bta-Mir-708  Cfa-Mir-708  Cja-Mir-708  Dno-Mir-708  Eca-Mir-708  Ete-Mir-708  Hsa-Mir-708  Laf-Mir-708  Mml-Mir-708  Mmr-Mir-708  Mmu-Mir-708  Ocu-Mir-708  Pab-Mir-708  Rno-Mir-708 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)
scaffold_40: 13990350-13990418 [+] UCSC
Seed AGGAGCU
Precursor
(pre-Mir +30nt flank)
ACAGCUGUGUGUGAAAUGGUAACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUAGAUGACUUGCACAUGAACACAACUAGACUGUGAGCUUCUAGAGGGCAGGGACCUUACCCUAGUCAUCUCUGC
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Structure
        10          20        30        40        50        60    
ACAGCUGUGUGUGAAAU--|  AA        A           A     C  GGGGUAGAUGAC 
                   GGU  CUGCCCUC AGGAGCUUACA UCUAG UG            \
                   CCA  GACGGGAG UCUUCGAGUGU AGAUC AC            U
CGUCUCUACUGAUCCCAUU^  GG        A           C     A  ACAAGUACACGU 
       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-708_5p

mirBase accessionMIMAT0047377
Sequence
0- AAGGAGCUUACAAUCUAGCUGGG -23
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Co-mature sequence

Cpo-Mir-708_3p

mirBase accessionMIMAT0047378
Sequence
46- CAACUAGACUGUGAGCUUCUAGA -69
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