MirGeneDB 3.0

MirGeneDB ID

Ocu-Mir-708

Family name MIR-708 (all species)
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-708
Paralogues
Orthologues Bta-Mir-708  Cfa-Mir-708  Cja-Mir-708  Cpo-Mir-708  Dno-Mir-708  Eca-Mir-708  Ete-Mir-708  Hsa-Mir-708  Laf-Mir-708  Mml-Mir-708  Mmr-Mir-708  Mmu-Mir-708  Pab-Mir-708  Rno-Mir-708 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chr1: 137399785-137399853 [+] UCSC Ensembl
Seed AACUAGA
Precursor
(pre-Mir +30nt flank)
ACUGCCGUGUAUGAAAUGGUAACUGCCCUCAAGGAGCUUACAAUCUAGCUGGGGGUGAAUGACGUGCACGCGAACACAACUAGACUGUGAGCUUCUAGAGGGCAGGGGCCUCACCCUAGUCAUCUCUCU
Get precursor sequence
Structure
        10          20        30        40        50        60    
ACUGCCGUGUAUGAAAU--|  AA        A           A     C  GGGGUGAAUGAC 
                   GGU  CUGCCCUC AGGAGCUUACA UCUAG UG            \
                   CCG  GACGGGAG UCUUCGAGUGU AGAUC AC            G
UCUCUCUACUGAUCCCACU^  GG        A           C     A  ACAAGCGCACGU 
       120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
He Ki Te To Wh
Star sequence

Ocu-Mir-708_5p*

mirBase accessionMIMAT0048561
Sequence
0- AAGGAGCUUACAAUCUAGCUGGG -23
Get sequence
Mature sequence

Ocu-Mir-708_3p

mirBase accessionMIMAT0048562
Sequence
46- CAACUAGACUGUGAGCUUCUAGA -69
Get sequence