| MirGeneDB ID | Tgu-Mir-2997 |
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| Family name |
MIR-2997 (all species) |
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| Species |
Zebra finch (Taeniopygia guttata) |
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| MiRBase ID |
tgu-mir-2997
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
T. guttata
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| Node of Origin (family) |
T. guttata
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Genome context
(TaeGut1_add) |
20: 6160929-6160990 [+]
UCSC
Ensembl
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| Seed |
AGGAGCU |
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Precursor
(pre-Mir +30nt flank) |
AGGCACAGGGGUCCAGGGCUCAGGAAGCACCAAACAUGUCCAAGUUCCUCACAGUGCUGGCAGUAGUCUGCAGGAGCUUGGACAUGUUAGGUGCAUUCUCAGCCCACCCAGCCUCCUGGCCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AGGCACAGGGGUCCAGG--| C A A CA UGCUGG
GCU AGGA GCACC AACAUGUCCAAGUUCCU CAG \
CGA UCUU CGUGG UUGUACAGGUUCGAGGA GUC C
UCCGGUCCUCCGACCCACC^ C A A C- UGAUGA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Tgu-Mir-2997_5p* |
| mirBase accession | MIMAT0014653 |
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| Sequence |
0- CAAACAUGUCCAAGUUCCUCACAG -24
Get sequence
|
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| Mature sequence |
Tgu-Mir-2997_3p |
| mirBase accession | MIMAT0014604 |
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| Sequence |
40- CAGGAGCUUGGACAUGUUAGGU -62
Get sequence
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