MirGeneDB 3.0
MirGeneDB ID

Mmu-Mir-28

Family name MIR-28 (all species)
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-28a
Paralogues
Orthologues Bta-Mir-28  Cfa-Mir-28  Cja-Mir-28  Cpo-Mir-28  Dno-Mir-28  Eca-Mir-28  Ete-Mir-28  Hsa-Mir-28  Laf-Mir-28  Mml-Mir-28  Mmr-Mir-28  Ocu-Mir-28  Pab-Mir-28  Rno-Mir-28 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr16: 24827868-24827929 [+] UCSC Ensembl
Seed AGGAGCU
Precursor
(pre-Mir +30nt flank)		 
UGAGGAAGCAUAGAGGUGGUCCCUACCUUCAAGGAGCUCACAGUCUAUUGAGUUGCCUUUCUGAUUCUCCCACUAGAUUGUGAGCUGCUGGAGGGCAGGCACUUGAAUUCAUCUGAAAAGGU
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Structure
        10          20        30        40        50        60
UGAGGAAGCAUAGAGGU--|  C   A     A  G             U  AGUUGCCUU 
                   GGU CCU CCUUC AG AGCUCACAGUCUA UG         U
                   UCA GGA GGGAG UC UCGAGUGUUAGAU AC         C
UGGAAAAGUCUACUUAAGU^  C   C     G  G             C  CCUCUUAGU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-28_5p
mirBase accessionMIMAT0000653
Sequence 
0- AAGGAGCUCACAGUCUAUUGAG -22
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Proposed targets microrna.org: MIMAT0000653
TargetScanVert: mmu-miR-28a-5p
miRDB: MIMAT0000653
Co-mature sequence

Mmu-Mir-28_3p
mirBase accessionMIMAT0004661
Sequence 
40- CACUAGAUUGUGAGCUGCUGGA -62
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Proposed targets microrna.org: MIMAT0004661
TargetScanVert: mmu-miR-28a-3p
miRDB: MIMAT0004661