MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-28

Family name MIR-28 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-28  Cfa-Mir-28  Cja-Mir-28  Cpo-Mir-28  Dno-Mir-28  Eca-Mir-28  Hsa-Mir-28  Laf-Mir-28  Mml-Mir-28  Mmr-Mir-28  Mmu-Mir-28  Ocu-Mir-28  Pab-Mir-28  Rno-Mir-28 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980368: 3181567-3181628 [-] UCSC
Seed ACUAGAU
Precursor
(pre-Mir +30nt flank)		 
AACAAACAAACAAGCACGGUCCUUGCCCUCAAGGAGCGCACAGUCUAUUGAGUUGCCGUUCUGACUUCCCCACUAGAUUGUGAGCUCCUGGAGGGCAGGCACUUUCGUUCAACUGGGAAAAA
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Structure
        10          20        30        40        50        60
AACAAACAAACAAGCAC--|  C         A      G         U  AGUUGCCGU 
                   GGU CUUGCCCUC AGGAGC CACAGUCUA UG         U
                   UCA GGACGGGAG UCCUCG GUGUUAGAU AC         C
AAAAAGGGUCAACUUGCUU^  C         G      A         C  CCCUUCAGU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ete-Mir-28_5p*
mirBase accessionNone
Sequence 
0- AAGGAGCGCACAGUCUAUUGAG -22
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Mature sequence

Ete-Mir-28_3p
mirBase accessionNone
Sequence 
40- CACUAGAUUGUGAGCUCCUGGA -62
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