MirGeneDB 3.0
52 microRNA genes with node of origin E. caballus
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Eca-Mir-8-P1a-as eca-mir-200b MIR-8 UCAUUAC None MIMAT0012910 CM009149.1 48714474 48714529 + E. caballus Nephrozoa No
Eca-Mir-8-P2a-as eca-mir-200a MIR-8 AUCGUUA None MIMAT0012909 CM009149.1 48713818 48713878 + E. caballus Nephrozoa No 1
Eca-Mir-506-P1m None MIR-506 GAUUGAC None None CM009179.1 120891676 120891733 - E. caballus Eutheria Unknown 1
Eca-Mir-506-P1n eca-mir-509a MIR-506 ACUGCAG MIMAT0013233 None CM009179.1 120886562 120886618 - E. caballus Eutheria No 1
Eca-Mir-506-P1o V eca-mir-509b MIR-506 UGACACC MIMAT0034709 None CM009179.1 120880989 120881048 - E. caballus Eutheria 3 No 1 1
Eca-Mir-506-P1p V eca-mir-514a MIR-506 UGACACC MIMAT0034715 None CM009179.1 120848454 120848514 - E. caballus Eutheria 3 No 1
Eca-Mir-506-P2b3 eca-mir-507a MIR-506 GAUUGGC None MIMAT0013230 CM009179.1 120853655 120853712 - E. caballus Eutheria No 1 1
Eca-Mir-506-P2b4 eca-mir-514b MIR-506 CUUGGCA MIMAT0034706 None CM009179.1 120897861 120897918 - E. caballus Eutheria No 1 1 1
Eca-Mir-506-P28a eca-mir-8908b-1 MIR-506 AUUAGUA None MIMAT0034697 CM009179.1 119919773 119919828 - E. caballus Eutheria No 1 1
Eca-Mir-506-P28b eca-mir-8908b-2 MIR-506 AUUAGUA None MIMAT0034697 CM009179.1 119917914 119917969 - E. caballus Eutheria No 1 1
Eca-Mir-506-P28c V eca-mir-8908c-3 MIR-506 UAGUACC None MIMAT0034696 CM009179.1 119915529 119915588 - E. caballus Eutheria 2 No 1
Eca-Mir-506-P28d1 None MIR-506 AUUAGUA None None CM009179.1 119911163 119911218 - E. caballus Eutheria No 1 1
Eca-Mir-506-P28d2 eca-mir-8908j MIR-506 AUUAGUA MIMAT0034711 None CM009179.1 119909277 119909332 - E. caballus Eutheria No 1 1
Eca-Mir-506-P28e1 eca-mir-8908c-2 MIR-506 UAGUACC None MIMAT0034696 CM009179.1 119906900 119906959 - E. caballus Eutheria No 1
Eca-Mir-506-P28e2 eca-mir-8908c-1 MIR-506 UAGUACC None MIMAT0034696 CM009179.1 119901226 119901285 - E. caballus Eutheria No 1
Eca-Mir-506-P28f1 eca-mir-8908b-3 MIR-506 ACCCGGA None MIMAT0034697 CM009179.1 119913038 119913093 - E. caballus Eutheria No 1 1
Eca-Mir-506-P28f2 eca-mir-8908b-5 MIR-506 ACCCGGA None MIMAT0034697 CM009179.1 119904407 119904462 - E. caballus Eutheria No 1 1
Eca-Mir-506-P28f3 eca-mir-8908b-4 MIR-506 ACCCGGA None MIMAT0034697 CM009179.1 119898661 119898716 - E. caballus Eutheria No 1 1
Eca-Mir-506-P29a1 eca-mir-8908e MIR-506 ACCCAGC MIMAT0034702 None CM009179.1 119916886 119916942 - E. caballus Eutheria No 1 1
Eca-Mir-506-P29a2 eca-mir-8908a-2 MIR-506 ACCCAGC None MIMAT0034713 CM009179.1 119908248 119908304 - E. caballus Eutheria No 1 1
Eca-Mir-506-P29b eca-mir-8908d-2 MIR-506 ACCCAGC None MIMAT0034698 CM009179.1 119897644 119897700 - E. caballus Eutheria No 1 1
Eca-Mir-506-P30a None MIR-506 AUUCGGU None None CM009179.1 119916031 119916088 - E. caballus Eutheria No 1
Eca-Mir-506-P30b1 V eca-mir-8908k-2 MIR-506 AUUCGGC MIMAT0034694 None CM009179.1 119907412 119907467 - E. caballus Eutheria 2 No 1
Eca-Mir-506-P30b2 V None MIR-506 AUUCGGC None None CM009179.1 119901738 119901793 - E. caballus Eutheria 2 No
Eca-Mir-506-P30c1 eca-mir-8908l-2 MIR-506 AGUCGGU MIMAT0034712 None CM009179.1 119913554 119913609 - E. caballus Eutheria No 1 1
Eca-Mir-506-P30c2 eca-mir-8908l-2 MIR-506 AGUCGGU MIMAT0034712 None CM009179.1 119899177 119899232 - E. caballus Eutheria No 1 1
Eca-Mir-506-P30d eca-mir-8908m MIR-506 AGUCAGU MIMAT0034717 None CM009179.1 119904923 119904978 - E. caballus Eutheria No 1 1
Eca-Mir-506-P31a None MIR-506 UUUGGUG None None CM009179.1 119905948 119906004 - E. caballus Eutheria No 1 1
Eca-Mir-506-P31b None MIR-506 UUUGGUG None None CM009179.1 119914584 119914640 - E. caballus Eutheria No 1 1
Eca-Mir-506-P31c None MIR-506 UUUGGUG None None CM009179.1 119900206 119900262 - E. caballus Eutheria No 1 1
Eca-Mir-506-P32 None MIR-506 GUCAGUG None None CM009179.1 119922309 119922365 - E. caballus Eutheria No 1
Eca-Mir-506-P33a eca-mir-8908h MIR-506 AUCCAGU MIMAT0034710 None CM009179.1 119921797 119921853 - E. caballus Eutheria No 1 1
Eca-Mir-506-P33b1 eca-mir-8908g-2 MIR-506 ACCCAGU MIMAT0034708 None CM009179.1 119912012 119912072 - E. caballus Eutheria No 1 1
Eca-Mir-506-P33b2 eca-mir-8908g-1 MIR-506 ACCCAGU MIMAT0034708 None CM009179.1 119910132 119910192 - E. caballus Eutheria No 1 1
Eca-Mir-506-P34 eca-mir-8908i MIR-506 ACCCGGU MIMAT0034719 None CM009179.1 119918769 119918825 - E. caballus Eutheria No 1
Eca-Mir-506-P35a V eca-mir-8908f-4 MIR-506 AGUCACU MIMAT0034701 None CM009179.1 119910654 119910704 - E. caballus Eutheria 2 No
Eca-Mir-506-P35b1 V eca-mir-8908f-3 MIR-506 AGUCACU MIMAT0034701 None CM009179.1 119903093 119903149 - E. caballus Eutheria 2 No 1 1
Eca-Mir-506-P35b2 V eca-mir-8908f-2 MIR-506 AGUCACU MIMAT0034701 None CM009179.1 119908765 119908821 - E. caballus Eutheria 2 No 1 1
Eca-Mir-506-P35c V eca-mir-8908f-1 MIR-506 AGUCACU MIMAT0034701 None CM009179.1 119898154 119898210 - E. caballus Eutheria 2 No 1 1
Eca-Mir-769-P4 eca-mir-769a MIR-769 GAGACCU MIMAT0013015 MIMAT0013016 CM009157.1 16822616 16822676 - E. caballus Eutheria Unknown 1
Eca-Mir-769-P5 eca-mir-769b MIR-769 GAAACCU MIMAT0013017 None CM009157.1 16638863 16638923 + E. caballus Eutheria Unknown 1
Eca-Mir-7177 eca-mir-7177b MIR-7177 AAUGGUC None MIMAT0034691 CM009160.1 16445430 16445497 + E. caballus E. caballus No 1 1
Eca-Mir-9142 eca-mir-9142 MIR-9142 AGUAACA None MIMAT0034695 CM009179.1 119927864 119927920 - E. caballus E. caballus No 1
Eca-Mir-9143 eca-mir-9143 MIR-9143 AGACAAA None MIMAT0034716 CM009179.1 119846646 119846702 - E. caballus E. caballus No 1
Eca-Mir-9159 eca-mir-9159 MIR-9159 CCUCUUU MIMAT0034736 None CM009161.1 46977350 46977407 + E. caballus E. caballus No
Eca-Novel-1 None ECA-NOVEL-1 AGCUGGC None None CM009171.1 46562614 46562682 - E. caballus E. caballus No 1
Eca-Novel-2 None ECA-NOVEL-2 UCCCUCC None None CM009154.1 27764893 27764956 + E. caballus E. caballus No 1
Eca-Novel-3 None ECA-NOVEL-3 GGCUCAG None None CM009167.1 37824427 37824482 + E. caballus E. caballus No
Eca-Novel-4 None ECA-NOVEL-4 CUUCCCA None None CM009156.1 81175483 81175542 - E. caballus E. caballus No
Eca-Novel-5 None ECA-NOVEL-5 CCAGACG None None CM009159.1 28760007 28760071 + E. caballus E. caballus No 1
Eca-Novel-6 None ECA-NOVEL-6 GGGCCAC None None CM009169.1 50627251 50627308 - E. caballus E. caballus No 1 1
Eca-Novel-7 None ECA-NOVEL-7 CACCACU None None CM009148.1 27313860 27313922 + E. caballus E. caballus No

(red - mature/co-mature, blue - star)

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