| MirGeneDB ID | Eca-Mir-9143 |
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| Family name |
MIR-9143 (all species) |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-9143
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. caballus
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| Node of Origin (family) |
E. caballus
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009179.1: 119846646-119846702 [-]
UCSC
Ensembl
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| Seed |
AGACAAA |
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Precursor
(pre-Mir +30nt flank) |
UUUCCUCUUUGGUUGGUACAUUUGACCCUGAAGACAAAUCUAUGAUGCAGAUGUAAUCAUAUUCUCUGCACCGUAGGUUUGUUGUCAGGGUUAAAUGGGCUACUUUACAUGGAAGCA
Get precursor sequence
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| Structure | 10 20 30 40 50
UUUCCUCUUUGGUUGGUA--| A A UGUAAU
CAUUUGACCCUGA GACAAAUCUAUG UGCAGA \
GUAAAUUGGGACU UUGUUUGGAUGC ACGUCU C
ACGAAGGUACAUUUCAUCGG^ G C CUUAUA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-9143_5p |
| mirBase accession | None |
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| Sequence |
0- AAGACAAAUCUAUGAUGCAGA -21
Get sequence
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| Star sequence |
Eca-Mir-9143_3p* |
| mirBase accession | MIMAT0034716 |
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| Sequence |
36- UGCACCGUAGGUUUGUUGUCA -57
Get sequence
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