| MirGeneDB ID | Eca-Mir-769-P5 |
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| Family name |
MIR-769 (all species) |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-769b
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| Paralogues |
Eca-Mir-769-P4
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| Orthologues |
Bta-Mir-769
Cfa-Mir-769
Cja-Mir-769
Cpo-Mir-769
Dno-Mir-769
Ete-Mir-769
Hsa-Mir-769
Mml-Mir-769
Mmr-Mir-769
Pab-Mir-769
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| Node of Origin (locus) |
E. caballus
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009157.1: 16638863-16638923 [+]
UCSC
Ensembl
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| Seed |
GAAACCU |
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Precursor
(pre-Mir +30nt flank) |
CGACUUGGUGCUGAUUUCUGCCCUCUGCCCGGAAACCUCUGGGUUCUGAGCUGUGACGUGGCUUCUGAGCUGGGAUCUCGGGGGUCUUGGUUCAGGGUUUGGGUCUCUGGGUUCUGGGCAC
Get precursor sequence
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| Structure | 10 20 30 40 50
CGACUUGGUGCUGAUUUCU----| CU C AA U G GUGACGU
GCCCU GCC GGA CCUCUGGG UCU AGCU \
UGGGA UGG UCU GGGGGCUC AGG UCGA G
CACGGGUCUUGGGUCUCUGGGUU^ CU U -- U G GUCUUCG
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | UGUG in loop |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-769-P5_5p (predicted) |
| mirBase accession | MIMAT0013017 |
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| Sequence |
0- GGAAACCUCUGGGUUCUGAGCU -22
Get sequence
|
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| Star sequence |
Eca-Mir-769-P5_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
39- CUGGGAUCUCGGGGGUCUUGGU -61
Get sequence
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