| MirGeneDB ID | Cpo-Mir-769 |
|---|
| Family name |
MIR-769 (all species) |
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| Seed |
GAGACCU |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-769
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-769
Cfa-Mir-769
Dno-Mir-769
Ete-Mir-769
Hsa-Mir-769
Mml-Mir-769
|
|---|
| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(cavPor3) |
scaffold_80: 6337196-6337256 [+]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
GUGCUUGGUGCUGAUUCCUGGGCUCUGACCUGAGACCUCUGGGUUCUGAGCUGUGAUAUUGUUCCUGAGCUGGGAUCUCCGGGGUCUUGGUUCAGGGUCGGGGCCUCUGGGUUCUGAGCAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUGCUUGGUGCUGAUUC--| G C UG U U G GUGAUAU
CU GGCUCUGA C AGACCUC GGG UCU AGCU \
GG CUGGGACU G UCUGGGG CUC AGG UCGA U
CACGAGUCUUGGGUCUCCG^ G U GU C U G GUCCUUG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Cpo-Mir-769_5p |
| mirBase accession | MIMAT0047385 |
|---|
| Sequence |
0- UGAGACCUCUGGGUUCUGAGCU -22
Get sequence
|
|---|
| Star sequence |
Cpo-Mir-769_3p* |
| mirBase accession | MIMAT0047386 |
|---|
| Sequence |
39- CUGGGAUCUCCGGGGUCUUGGU -61
Get sequence
|
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