MirGeneDB 3.0
110 microRNA genes with node of origin X. tropicalis
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Xtr-Mir-26-P2c xtr-mir-26-2 MIR-26 UCAAGUA MIMAT0003569 None chr9 77064704 77064764 + X. tropicalis Vertebrata No 1
Xtr-Mir-26-P2d xtr-mir-26-2 MIR-26 UCAAGUA MIMAT0003569 None chr9 77070820 77070880 + X. tropicalis Vertebrata No 1
Xtr-Mir-202-P1 xtr-mir-202-1 MIR-202 UCCUAUG MIMAT0003620 MIMAT0003621 chr7 18578561 18578618 + X. tropicalis Vertebrata No 1
Xtr-Mir-202-P2 xtr-mir-202-2 MIR-202 UCCUAUG MIMAT0003620 MIMAT0003621 chr7 18586271 18586328 + X. tropicalis Vertebrata No 1
Xtr-Mir-430-o5a1 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133250942 133251005 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a2 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133252554 133252617 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a3 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133254161 133254224 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a4 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133258162 133258225 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a5 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133259769 133259832 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a6 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133261370 133261433 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a7 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133266070 133266133 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a8 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133267668 133267731 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a9 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133270884 133270947 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a10 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133272485 133272548 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a11 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133301957 133302020 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a12 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133221390 133221453 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a13 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133222430 133222493 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a14 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133224045 133224108 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a15 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133227259 133227322 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a16 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133230494 133230557 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a17 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133232106 133232169 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a18 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133233724 133233787 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a19 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133244878 133244941 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a20 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133243264 133243327 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a21 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133241228 133241291 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a22 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133238019 133238082 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5a23 xtr-mir-427-1 MIR-430 AAGUGCU None MIMAT0005566 chr3 133234149 133234212 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5b None MIR-430 AAGUGCU None None chr3 133257735 133257798 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c1 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133250515 133250578 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c2 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133252131 133252194 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c3 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133253734 133253797 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c4 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133255350 133255413 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c5 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133259351 133259414 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c6 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133260947 133261010 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c7 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133262551 133262614 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c8 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133264474 133264537 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c9 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133265655 133265718 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c10 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133267255 133267318 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c11 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133301534 133301597 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c12 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133273665 133273728 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c13 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133272063 133272126 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c14 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133270461 133270524 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c15 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133268857 133268920 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c16 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133222856 133222919 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c17 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133224471 133224534 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c18 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133226070 133226133 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c19 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133229305 133229368 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c20 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133230917 133230980 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c21 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133234574 133234637 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c22 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133238439 133238502 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c23 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133243690 133243753 - X. tropicalis Vertebrata No 1
Xtr-Mir-430-o5c24 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133241651 133241714 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5c25 xtr-mir-427-3 MIR-430 AAGUGCU None MIMAT0005566 chr3 133240046 133240109 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5d1 None MIR-430 AAGUGCU None None chr3 133227685 133227748 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5d2 None MIR-430 AAGUGCU None None chr3 133236181 133236244 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5e None MIR-430 AAGUGCU None None chr3 133232535 133232598 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5f1 None MIR-430 AAGUGCU None None chr3 133228887 133228950 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5f2 None MIR-430 AAGUGCU None None chr3 133239620 133239683 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5g None MIR-430 CCCAAAA None None chr3 133225643 133225706 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5h None MIR-430 CCCAAAA None None chr3 133257277 133257340 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5j None MIR-430 CCCAAAA None None chr3 133260659 133260722 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k1 None MIR-430 AAGUGCU None None chr3 133250377 133250440 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k2 None MIR-430 AAGUGCU None None chr3 133251993 133252056 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k3 None MIR-430 AAGUGCU None None chr3 133255212 133255275 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k4 None MIR-430 AAGUGCU None None chr3 133259213 133259276 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k5 None MIR-430 AAGUGCU None None chr3 133260809 133260872 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k6 None MIR-430 AAGUGCU None None chr3 133262413 133262476 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k7 None MIR-430 AAGUGCU None None chr3 133263894 133263957 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k8 None MIR-430 AAGUGCU None None chr3 133264336 133264399 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k9 None MIR-430 AAGUGCU None None chr3 133265517 133265580 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k10 None MIR-430 AAGUGCU None None chr3 133301396 133301459 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k11 None MIR-430 AAGUGCU None None chr3 133273527 133273590 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k12 None MIR-430 AAGUGCU None None chr3 133271926 133271989 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k13 None MIR-430 AAGUGCU None None chr3 133270323 133270386 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k14 None MIR-430 AAGUGCU None None chr3 133268719 133268782 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k15 None MIR-430 AAGUGCU None None chr3 133267117 133267180 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k16 None MIR-430 AAGUGCU None None chr3 133221502 133221565 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k17 None MIR-430 AAGUGCU None None chr3 133222994 133223057 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k18 None MIR-430 AAGUGCU None None chr3 133224608 133224671 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k19 None MIR-430 AAGUGCU None None chr3 133226208 133226271 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k20 None MIR-430 AAGUGCU None None chr3 133227823 133227886 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k21 None MIR-430 AAGUGCU None None chr3 133229443 133229506 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k22 None MIR-430 AAGUGCU None None chr3 133231055 133231118 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k23 None MIR-430 AAGUGCU None None chr3 133243828 133243891 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k24 None MIR-430 AAGUGCU None None chr3 133241789 133241852 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k25 None MIR-430 AAGUGCU None None chr3 133240184 133240247 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k26 None MIR-430 AAGUGCU None None chr3 133234711 133234774 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5k27 None MIR-430 AAGUGCU None None chr3 133232673 133232736 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l1 None MIR-430 AAGUGCU None None chr3 133250811 133250874 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l2 None MIR-430 AAGUGCU None None chr3 133252416 133252479 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l3 None MIR-430 AAGUGCU None None chr3 133254030 133254093 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l4 None MIR-430 AAGUGCU None None chr3 133258031 133258094 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l5 None MIR-430 AAGUGCU None None chr3 133259638 133259701 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l6 None MIR-430 AAGUGCU None None chr3 133269151 133269214 + X. tropicalis Vertebrata No 1
Xtr-Mir-430-o5l7 None MIR-430 AAGUGCU None None chr3 133270746 133270809 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l8 None MIR-430 AAGUGCU None None chr3 133272347 133272410 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l9 None MIR-430 AAGUGCU None None chr3 133301819 133301882 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l10 None MIR-430 AAGUGCU None None chr3 133224176 133224239 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l11 None MIR-430 AAGUGCU None None chr3 133227390 133227453 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l12 None MIR-430 AAGUGCU None None chr3 133243395 133243458 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l13 None MIR-430 AAGUGCU None None chr3 133241366 133241429 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l14 None MIR-430 AAGUGCU None None chr3 133239751 133239814 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l15 None MIR-430 AAGUGCU None None chr3 133238157 133238220 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l16 None MIR-430 AAGUGCU None None chr3 133235886 133235949 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l17 None MIR-430 AAGUGCU None None chr3 133234280 133234343 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l18 None MIR-430 AAGUGCU None None chr3 133232237 133232300 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5l19 None MIR-430 AAGUGCU None None chr3 133230632 133230695 - X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5m None MIR-430 AAGUGCU None None chr3 133261232 133261295 + X. tropicalis Vertebrata No 1 1
Xtr-Mir-430-o5n1 None MIR-430 AAGUGCU None None chr3 133262839 133262902 + X. tropicalis Vertebrata No 1
Xtr-Mir-430-o5n2 None MIR-430 AAGUGCU None None chr3 133265932 133265995 + X. tropicalis Vertebrata No 1 1

(red - mature/co-mature, blue - star)

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