MirGeneDB 3.0

9 microRNA genes with seed ACAGCGC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Xla-Mir-460-P2d None MIR-460 CCUCAUU None None NC_030739.1 72717056 72717114 + X. laevis Osteichthyes No 1
Xla-Mir-460-P2c None MIR-460 CCUCAUU None None NC_030738.1 44933548 44933606 + X. laevis Osteichthyes No 1
Gja-Mir-460-P2 None MIR-460 CCUCAUU None None NW_015169192.1 1195070 1195128 - Osteichthyes Osteichthyes Yes 1
Xla-Mir-460-P1b None MIR-460 CUGCAUU None None NC_030735.1 3951266 3951324 + X. laevis Osteichthyes No 1 1
Xla-Mir-460-P1a None MIR-460 CUGCAUU None None NC_030734.1 4709482 4709540 + X. laevis Osteichthyes No 1 1
Tni-Mir-460-P1 tni-mir-460 MIR-460 ACAGCGC None MIMAT0002998 15_random 1243748 1243806 - Osteichthyes Osteichthyes Yes 1
Sha-Mir-460-P1 None MIR-460 CUGCAUU None None GL841580.1 38710 38767 - Osteichthyes Osteichthyes No 1
Gmo-Mir-460-P1 gmo-mir-460 MIR-460 CUGCAUU MIMAT0044248 MIMAT0044249 GeneScaffold_377 671954 672012 + Osteichthyes Osteichthyes Yes 1 1
Dre-Mir-460-P1 dre-mir-460 MIR-460 ACAGCGC MIMAT0001887 MIMAT0001888 chr2 2301366 2301424 - Osteichthyes Osteichthyes Yes 1 1

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all