MirGeneDB 3.0

17 microRNA genes with seed AAGUCUU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Efe-Mir-2000-P2 None MIR-2000 AAGUCUU None None Efet.01.1442459 57 114 + E. fetida Sipuncula + Pleistoannelida No 1
Efe-Mir-2000-P1 None MIR-2000 AAGUCUU None None Efet.01.58205 3094 3153 - E. fetida Sipuncula + Pleistoannelida No 1
Pdu-Mir-2000 V None MIR-2000 AAGUCUU None None JAPTHN010000002.1 43826993 43827050 + Sipuncula + Pleistoannelida Sipuncula + Pleistoannelida 2 No 1
Snu-Mir-2000 None MIR-2000 AAGUCUU None None CM049312.1 23150774 23150830 + Sipuncula + Pleistoannelida Sipuncula + Pleistoannelida No
Cte-Mir-2000 cte-mir-2000 MIR-2000 AAGUCUU None MIMAT0009711 CAPTEscaffold_24 172461 172517 - Sipuncula + Pleistoannelida Sipuncula + Pleistoannelida No
Pab-Mir-1264 None MIR-1264 GGUCCUC None None CM054702.2 120501747 120501809 + Eutheria Eutheria Unknown
Ocu-Mir-1264 ocu-mir-1264 MIR-1264 AAGUCUU MIMAT0048589 MIMAT0048590 chrX 63088620 63088682 + Eutheria Eutheria No
Mmr-Mir-1264 None MIR-1264 AAGUCUU None None CM007693.1 42598756 42598818 + Eutheria Eutheria Unknown
Mml-Mir-1264 None MIR-1264 AAGUCUU None None CM014356.1 111203690 111203752 + Eutheria Eutheria No
Laf-Mir-1264 None MIR-1264 AAGUCUU None None GL010059.1 16566730 16566792 - Eutheria Eutheria Unknown
Hsa-Mir-1264 hsa-mir-1264 MIR-1264 GGUCCUC None MIMAT0005791 chrX 114652655 114652717 + Eutheria Eutheria No
Ete-Mir-1264 None MIR-1264 AAGUCUU None None JH980336 11901675 11901737 + Eutheria Eutheria Unknown
Eca-Mir-1264 eca-mir-1264 MIR-1264 AAGUCUU None MIMAT0013195 CM009179.1 94830798 94830860 + Eutheria Eutheria Unknown
Cpo-Mir-1264 cpo-mir-1264 MIR-1264 AAGUCUU MIMAT0047409 MIMAT0047410 scaffold_46 5270718 5270780 - Eutheria Eutheria No
Cja-Mir-1264 None MIR-1264 GGUCCUC None None CM021937.1 106962473 106962535 + Eutheria Eutheria No
Cfa-Mir-1264 None MIR-1264 AAGUCUU None None chrX 87401652 87401714 + Eutheria Eutheria No
Bta-Mir-1264 None MIR-1264 AAGUCUU None None NC_037357.1 62992996 62993058 + Eutheria Eutheria No

(red - mature/co-mature, blue - star)

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