MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-1264

Family name MIR-1264 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1264  Cfa-Mir-1264  Cpo-Mir-1264  Eca-Mir-1264  Ete-Mir-1264  Hsa-Mir-1264  Laf-Mir-1264  Mml-Mir-1264  Mmr-Mir-1264  Mmu-Mir-1264  Ocu-Mir-1264  Pab-Mir-1264  Rno-Mir-1264 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 106962473-106962535 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1264)		 Mir-1912 CM021937.1: 106961435-106961489 [+] UCSC Ensembl
Mir-1264 CM021937.1: 106962473-106962535 [+] UCSC Ensembl
Seed GGUCCUC
Precursor
(pre-Mir +30nt flank)		 
CAUUUUGUUUCUUCAUGCCUGGCAUGUAGCGGGUCCUCAGUAAGUAUUUGUUGAAAGAAUAAAUAAACUGACAAGUCUUAUUUGAGCACCUGUUAUGUGGAGGAUAAAAUCCUACAACCCAGG
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Structure
        10           20        30        40         50        60 
CAUUUUGUUUCUUCAUG---|  GG            C     -    U       GAAAGAAU 
                    CCU  CAUGUAGCGGGU CUCAG UAAG AUUUGUU        \
                    GGA  GUGUAUUGUCCA GAGUU AUUC UGAACAG        A
GGACCCAACAUCCUAAAAUA^  G-            C     U    -       UCAAAUAA 
 120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
To
Mature sequence

Cja-Mir-1264_5p (predicted)
mirBase accessionNone
Sequence 
0- GGGUCCUCAGUAAGUAUUUGUU -22
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Co-mature sequence

Cja-Mir-1264_3p
mirBase accessionNone
Sequence 
41- CAAGUCUUAUUUGAGCACCUGU -63
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