MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-276-as

Family name MIR-276 (all species)
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-276b
Paralogues Tca-Mir-276 
Orthologues Bge-Mir-276  Dlo-Mir-276  Dma-Mir-276  Dpu-Mir-276  Hme-Mir-276  Isc-Mir-276  Tur-Mir-276 
Node of Origin (locus) T. castaneum
Node of Origin (family) Arthropoda
Genome context
(Tcas5.2)		 LG3: 12483940-12483997 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-276-as)		 Mir-276 LG3: 12483938-12483995 [-] Ensembl
Mir-276-as LG3: 12483940-12483997 [+] Ensembl
Seed AGGAACU
Precursor
(pre-Mir +30nt flank)		 
GUGUGUGCGUUGAUGGUCGGUAAAUCCAAGAGCACGGUAUGAAGUUCCUACAGCCGAAAAAUCACGUAGGAACUCUAUACCUCGCUAGUGGUCUACCAAAAAGAGCGCCGUUCCGCCG
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Structure
        10           20        30        40        50        
GUGUGUGCGUUGAUGGUC---|   AAU   AG   AC      A         AGCCGA 
                     GGUA   CCA  AGC  GGUAUG AGUUCCUAC      A
                     CCAU   GGU  UCG  CCAUAU UCAAGGAUG      A
GCCGCCUUGCCGCGAGAAAAA^   CU-   GA   CU      C         CACUAA 
      110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-276-as_5p*
mirBase accessionMIMAT0045604
Sequence 
0- AGCACGGUAUGAAGUUCCUACA -22
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Mature sequence

Tca-Mir-276-as_3p
mirBase accessionMIMAT0045605
Sequence 
36- UAGGAACUCUAUACCUCGCUAG -58
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