MirGeneDB 2.1
MirGeneDB ID

Sha-Mir-7398-o4-v2

Family name MIR-7398 (all species)
Seed GUGUAGA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7398-o1  Sha-Mir-7398-o2  Sha-Mir-7398-o3-v1  Sha-Mir-7398-o3-v2  Sha-Mir-7398-o4-v1  Sha-Mir-7398-o5  Sha-Mir-7398-o6  Sha-Mir-7398-o7  Sha-Mir-7398-o8  Sha-Mir-7398-o9  Sha-Mir-7398-o10  Sha-Mir-7398-o11-v1  Sha-Mir-7398-o11-v2  Sha-Mir-7398-o12-v1  Sha-Mir-7398-o12-v2  Sha-Mir-7398-o13  Sha-Mir-7398-o14 
Orthologues Mdo-Mir-7398-P4 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867608.1: 2082125-2082183 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCUUUUCUUUCACCUCCAGGUGCCCAAUUGUGUAGAGGUAAGAAAUAUGCUGUGUUCUUGGUUGGUAUAUUUCUUGCCUCUACCAAUUGAGCAUAUUGGACUUGGCUGCUGCCCUUU
Get precursor sequence
Structure
        10         20         30        40        50         
CUCCUUUUCUUUCACCU-    -|   C      U                    GUGUU 
                  CCAG GUGC CAAUUG GUAGAGGUAAGAAAUAUGCU     C
                  GGUU UACG GUUAAC CAUCUCCGUUCUUUAUAUGG     U
UUUCCCGUCGUCGGUUCA    A^   A      -                    UUGGU 
       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7398-o4-v2_5p
mirBase accessionNone
Sequence 
0- UGUGUAGAGGUAAGAAAUAUGCU -23
Get sequence
Star sequence

Sha-Mir-7398-o4-v2_3p*
mirBase accessionNone
Sequence 
37- UAUAUUUCUUGCCUCUACCAAU -59
Get sequence