MirGeneDB 2.1
MirGeneDB ID

Sha-Mir-7398-o10

Family name MIR-7398 (all species)
Seed GUAGAGA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7398-o1  Sha-Mir-7398-o2  Sha-Mir-7398-o3-v1  Sha-Mir-7398-o3-v2  Sha-Mir-7398-o4-v1  Sha-Mir-7398-o4-v2  Sha-Mir-7398-o5  Sha-Mir-7398-o6  Sha-Mir-7398-o7  Sha-Mir-7398-o8  Sha-Mir-7398-o9  Sha-Mir-7398-o11-v1  Sha-Mir-7398-o11-v2  Sha-Mir-7398-o12-v1  Sha-Mir-7398-o12-v2  Sha-Mir-7398-o13  Sha-Mir-7398-o14 
Orthologues Mdo-Mir-7398-P10a  Mdo-Mir-7398-P10b 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867608.1: 2093388-2093444 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGGCGCUCUGUCCUCCAGGUGUCUGGCAGUGUAGAGAGGGGUGAAGGUUGCUGUGAUAUAUUAGGUAAUUCACCCUUCUCUCACUAACCGGCACCUCGGGCUCUUCUUCGACCCCA
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Structure
        10           20         30        40        50         
CGGGCGCUCUGUCCUCC---|    U    C-    U            AG     UGUGAU 
                    AGGUG CUGG  AGUG AGAGAGGGGUGA  GUUGC      \
                    UCCAC GGCC  UCAC UCUCUUCCCACU  UAAUG      A
ACCCCAGCUUCUUCUCGGGC^    -    AA    -            --     GAUUAU 
     110       100         90         80          70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7398-o10_5p
mirBase accessionNone
Sequence 
0- UGUAGAGAGGGGUGAAGGUUGC -22
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Co-mature sequence

Sha-Mir-7398-o10_3p
mirBase accessionNone
Sequence 
36- UAAUUCACCCUUCUCUCACUA -57
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