MirGeneDB 2.1
MirGeneDB ID

Sha-Mir-7398-o4-v1

Family name MIR-7398 (all species)
Seed UGUGUAG
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7398-o1  Sha-Mir-7398-o2  Sha-Mir-7398-o3-v1  Sha-Mir-7398-o3-v2  Sha-Mir-7398-o4-v2  Sha-Mir-7398-o5  Sha-Mir-7398-o6  Sha-Mir-7398-o7  Sha-Mir-7398-o8  Sha-Mir-7398-o9  Sha-Mir-7398-o10  Sha-Mir-7398-o11-v1  Sha-Mir-7398-o11-v2  Sha-Mir-7398-o12-v1  Sha-Mir-7398-o12-v2  Sha-Mir-7398-o13  Sha-Mir-7398-o14 
Orthologues Mdo-Mir-7398-P4 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867608.1: 2082124-2082184 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUCCUUUUCUUUCACCUCCAGGUGCCCAAUUGUGUAGAGGUAAGAAAUAUGCUGUGUUCUUGGUUGGUAUAUUUCUUGCCUCUACCAAUUGAGCAUAUUGGACUUGGCUGCUGCCCUUUG
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Structure
        10         20         30        40        50        60
UCUCCUUUUCUUUCACC-     -|   C      U                   UGUGUU 
                  UCCAG GUGC CAAUUG GUAGAGGUAAGAAAUAUGC      C
                  AGGUU UACG GUUAAC CAUCUCCGUUCUUUAUAUG      U
GUUUCCCGUCGUCGGUUC     A^   A      -                   GUUGGU 
 .       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7398-o4-v1_5p
mirBase accessionNone
Sequence 
0- UUGUGUAGAGGUAAGAAAUAUGC -23
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Star sequence

Sha-Mir-7398-o4-v1_3p*
mirBase accessionNone
Sequence 
39- AUAUUUCUUGCCUCUACCAAUU -61
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