MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-15-P2o1

Family name MIR-15 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID
Paralogues Pma-Mir-15-P1o1  Pma-Mir-15-P1o2  Pma-Mir-15-P1o3  Pma-Mir-15-P2o4 
Orthologues Cin-Mir-15-P2 
Node of Origin (locus) P. marinus
Node of Origin (family) Olfactores
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046123.1: 1713872-1713934 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2o1)		 Mir-15-P2o1 NC_046123.1: 1713872-1713934 [-] UCSC Ensembl
Mir-15-P1o1 NC_046123.1: 1714265-1714327 [-] UCSC Ensembl
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
UCUCAAAGUAACAUACUGCCUUUCCUGCUGUAGCAGCACGUAAAUAUUGGCGUGGGCACUUGCUGAAACCUCCAAUGUUAGCUUGCUGCUGCAGUUUGAUUGGCCCUUUCUCCGGACCCGAAA
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Structure
        10          20        30        40        50        60 
UCUCAAAGUAACAUACU--|  UU  CU            C  A        CGUGGGCACU 
                   GCC  UC  GCUGUAGCAGCA GU AAUAUUGG          \
                   CGG  AG  UGACGUCGUCGU CG UUGUAACC          U
AAAGCCCAGGCCUCUUUCC^  UU  UU            U  A        UCCAAAGUCG 
 120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-15-P2o1_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACGUAAAUAUUGGCG -22
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Star sequence

Pma-Mir-15-P2o1_3p* (predicted)
mirBase accessionNone
Sequence 
41- CCAAUGUUAGCUUGCUGCUGCA -63
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