MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-15-P1o2

Family name MIR-15 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-15b
Paralogues Pma-Mir-15-P1o1  Pma-Mir-15-P1o3  Pma-Mir-15-P2o1  Pma-Mir-15-P2o4 
Orthologues Cin-Mir-15-P1 
Node of Origin (locus) P. marinus
Node of Origin (family) Olfactores
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NW_022638143.1: 26054-26110 [+] UCSC Ensembl
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
AUGGCACAGGUGGGGAGGCCCUUGGCGCCGUAGCAGCACAUCAUGGAUUGCGGGUGUUGUAGAUGCAAGCCAUGCUGUGCGGCCUUGGUGCCAGGGAGCGCUAGCAACUGGUGAAAU
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Structure
        10          20        30        40        50        
AUGGCACAGGUGGGGAG-  -|          UA  A     U     A     GGUGU 
                  GC CCUUGGCGCCG  GC GCACA CAUGG UUGCG     \
                  CG GGGACCGUGGU  CG CGUGU GUACC AACGU     U
UAAAGUGGUCAACGAUCG  A^          UC  G     C     G     AGAUG 
     110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-15-P1o2_5p
mirBase accessionMIMAT0019380
Sequence 
0- UAGCAGCACAUCAUGGAUUGCG -22
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Star sequence

Pma-Mir-15-P1o2_3p* (predicted)
mirBase accessionNone
Sequence 
35- CAAGCCAUGCUGUGCGGCCUUG -57
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